RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C SRL2Q12020 392 aa8.62□□□□□ -1.03
SSN3YPL042C YLR126CQ12288 251 aa8.62□□□□□ -1.03
SSN3YPL042C TRM13Q12383 476 aa8.62□□□□□ -1.03
SSN3YPL042C RRI1Q12468 440 aa8.62□□□□□ -1.03
SSN3YPL042C MHF1Q3E835 90 aa8.62□□□□□ -1.03
SSN3YPL042C TPK3P05986 398 aa8.61□□□□□ -1.03
SSN3YPL042C MSN2P33748 704 aa8.61□□□□□ -1.03
SSN3YPL042C VBA2P38358 474 aaKnown RBP8.61□□□□□ -1.03
SSN3YPL042C PRE6P40303 254 aaKnown RBP8.61□□□□□ -1.03
SSN3YPL042C SNM1P40993 198 aa8.61□□□□□ -1.03
SSN3YPL042C NUP49Q02199 472 aa8.61□□□□□ -1.03
SSN3YPL042C ELP4Q02884 456 aaKnown RBP8.61□□□□□ -1.03
SSN3YPL042C AIM34Q03673 198 aa8.61□□□□□ -1.03
SSN3YPL042C SMP3Q04174 516 aa8.61□□□□□ -1.03
SSN3YPL042C PEX30Q06169 523 aa8.61□□□□□ -1.03
SSN3YPL042C YPL119C-AQ3E751 87 aa8.61□□□□□ -1.03
SSN3YPL042C SPO7P18410 259 aa8.6□□□□□ -1.03
SSN3YPL042C SEC59P20048 519 aa8.6□□□□□ -1.03
SSN3YPL042C OCH1P31755 480 aa8.6□□□□□ -1.03
SSN3YPL042C AUR1P36107 401 aaPredicted RBP8.6□□□□□ -1.03
SSN3YPL042C AHP1P38013 176 aaKnown RBP8.6□□□□□ -1.03
SSN3YPL042C COX15P40086 486 aa8.6□□□□□ -1.03
SSN3YPL042C MRX5P47007 382 aa8.6□□□□□ -1.03
SSN3YPL042C YGR149WP48236 432 aa8.6□□□□□ -1.03
SSN3YPL042C RPS12P48589 143 aaKnown RBP8.6□□□□□ -1.03
SSN3YPL042C ERG13P54839 491 aaKnown RBP8.6□□□□□ -1.03
SSN3YPL042C GPI12P23797 304 aa8.59□□□□□ -1.03
SSN3YPL042C VMA3P25515 160 aa8.59□□□□□ -1.03
SSN3YPL042C RRG9P40156 214 aa8.59□□□□□ -1.03
SSN3YPL042C RFC2P40348 353 aa8.59□□□□□ -1.03
SSN3YPL042C NIF3P53081 288 aa8.59□□□□□ -1.03
SSN3YPL042C VPS73P53142 486 aaKnown RBP8.59□□□□□ -1.03
SSN3YPL042C COS1P53822 381 aa8.59□□□□□ -1.03
SSN3YPL042C MRPL51Q06090 140 aaPredicted RBP8.59□□□□□ -1.03
SSN3YPL042C ERG8P24521 451 aa8.59□□□□□ -1.03
SSN3YPL042C MRPL32P25348 183 aa8.59□□□□□ -1.03
SSN3YPL042C SUA7P29055 345 aaPredicted RBP8.59□□□□□ -1.03
SSN3YPL042C TRR2P38816 342 aa8.59□□□□□ -1.03
SSN3YPL042C YCH1P42937 148 aa8.59□□□□□ -1.03
SSN3YPL042C YNR062CP53748 327 aa8.59□□□□□ -1.03
SSN3YPL042C SDH7Q04401 133 aa8.59□□□□□ -1.03
SSN3YPL042C RNH202Q05635 350 aa8.59□□□□□ -1.03
SSN3YPL042C PRE1P22141 198 aaKnown RBP8.58□□□□□ -1.04
SSN3YPL042C YCR006CP25350 157 aa8.58□□□□□ -1.04
SSN3YPL042C CPR3P25719 182 aa8.58□□□□□ -1.04
SSN3YPL042C YIL086CP40503 102 aa8.58□□□□□ -1.04
SSN3YPL042C YGR210CP42942 411 aa8.58□□□□□ -1.04
SSN3YPL042C YFL054CP43549 646 aa8.58□□□□□ -1.04
SSN3YPL042C NAT4Q04751 285 aa8.58□□□□□ -1.04
SSN3YPL042C STF2P16965 84 aa8.57□□□□□ -1.04
SSN3YPL042C NUP1P20676 1076 aa8.57□□□□□ -1.04
SSN3YPL042C CLB2P24869 491 aa8.57□□□□□ -1.04
SSN3YPL042C IKI1P38874 309 aa8.57□□□□□ -1.04
SSN3YPL042C FMP52P40008 231 aa8.57□□□□□ -1.04
SSN3YPL042C LYS20P48570 428 aaKnown RBP8.57□□□□□ -1.04
SSN3YPL042C SYF2P53277 215 aaPredicted RBP8.57□□□□□ -1.04
SSN3YPL042C INN1P53901 409 aa8.57□□□□□ -1.04
SSN3YPL042C PLB2Q03674 706 aa8.57□□□□□ -1.04
SSN3YPL042C ATG39Q06159 398 aa8.57□□□□□ -1.04
SSN3YPL042C PRP11Q07350 266 aaPredicted RBP8.57□□□□□ -1.04
SSN3YPL042C MED11Q99278 115 aa8.57□□□□□ -1.04
SSN3YPL042C MCK1P21965 375 aaKnown RBP8.56□□□□□ -1.04
SSN3YPL042C MXR2P25566 168 aa8.56□□□□□ -1.04
SSN3YPL042C DEG1P31115 442 aaKnown RBP8.56□□□□□ -1.04
SSN3YPL042C RPS27AP35997 82 aaKnown RBP8.56□□□□□ -1.04
SSN3YPL042C YKL162CP36052 402 aa8.56□□□□□ -1.04
SSN3YPL042C RPS27BP38711 82 aa8.56□□□□□ -1.04
SSN3YPL042C CIN2P46670 268 aa8.56□□□□□ -1.04
SSN3YPL042C NUP57P48837 541 aa8.56□□□□□ -1.04
SSN3YPL042C YGR168CP53293 376 aa8.56□□□□□ -1.04
SSN3YPL042C NRM1P53718 249 aa8.56□□□□□ -1.04
SSN3YPL042C YPL077CQ02831 240 aa8.56□□□□□ -1.04
SSN3YPL042C YDR541CQ03049 344 aa8.56□□□□□ -1.04
SSN3YPL042C SIZ1Q04195 904 aa8.56□□□□□ -1.04
SSN3YPL042C AGE1Q04412 482 aa8.56□□□□□ -1.04
SSN3YPL042C DAL82P21705 255 aa8.56□□□□□ -1.04
SSN3YPL042C NAR1P23503 491 aaKnown RBP8.56□□□□□ -1.04
SSN3YPL042C PUT3P25502 979 aaPredicted RBP8.56□□□□□ -1.04
SSN3YPL042C ISC1P40015 477 aaKnown RBP8.56□□□□□ -1.04
SSN3YPL042C YIL152WP40455 235 aa8.56□□□□□ -1.04
SSN3YPL042C SPT20P50875 604 aa8.56□□□□□ -1.04
SSN3YPL042C DOC1P53068 250 aa8.56□□□□□ -1.04
SSN3YPL042C MPC1P53157 130 aaKnown RBP8.56□□□□□ -1.04
SSN3YPL042C UBC7Q02159 165 aa8.56□□□□□ -1.04
SSN3YPL042C ABF2Q02486 183 aa8.56□□□□□ -1.04
SSN3YPL042C CTL1Q03220 320 aaKnown RBP8.56□□□□□ -1.04
SSN3YPL042C THI72Q08579 599 aa8.56□□□□□ -1.04
SSN3YPL042C YPR1Q12458 312 aa8.56□□□□□ -1.04
SSN3YPL042C YOL163WP0CF20 169 aa8.55□□□□□ -1.04
SSN3YPL042C ACH1P32316 526 aa8.55□□□□□ -1.04
SSN3YPL042C YOR062CP36025 268 aa8.55□□□□□ -1.04
SSN3YPL042C NAT2P37293 288 aa8.55□□□□□ -1.04
SSN3YPL042C YPT31P38555 223 aaKnown RBP8.55□□□□□ -1.04
SSN3YPL042C SLS1P42900 643 aa8.55□□□□□ -1.04
SSN3YPL042C YNR071CP53757 342 aa8.55□□□□□ -1.04
SSN3YPL042C YNL184CP53876 108 aa8.55□□□□□ -1.04
SSN3YPL042C IPK1Q06667 281 aa8.55□□□□□ -1.04
SSN3YPL042C HFA1P32874 2273 aa8.54□□□□□ -1.04
SSN3YPL042C TFS1P14306 219 aa8.54□□□□□ -1.04
SSN3YPL042C YEF1P32622 495 aa8.54□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 164.1 ms