RNA–Protein interactions for RNA: YNL258C

DSL1, Transcript of Peripheral membrane protein needed for Golgi-to-ER retrograde traffic, yeast

Gene DSL1, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSL1	YNL258C	DRE2	P36152	348 aa		3	□□□□□ -1.93
DSL1	YNL258C	FZO1	P38297	855 aa		3	□□□□□ -1.93
DSL1	YNL258C	PRE6	P40303	254 aa	Known RBP	3	□□□□□ -1.93
DSL1	YNL258C	YLR152C	P54072	576 aa		3	□□□□□ -1.93
DSL1	YNL258C	GIM5	Q04493	163 aa		3	□□□□□ -1.93
DSL1	YNL258C	FAR8	Q05040	523 aa		3	□□□□□ -1.93
DSL1	YNL258C	YBL112C	Q3E7Y4	105 aa		3	□□□□□ -1.93
DSL1	YNL258C	SWR1	Q05471	1514 aa		3	□□□□□ -1.93
DSL1	YNL258C	SIR4	P11978	1358 aa		3	□□□□□ -1.93
DSL1	YNL258C	COX10	P21592	462 aa		3	□□□□□ -1.93
DSL1	YNL258C	IMP1	P28627	190 aa		3	□□□□□ -1.93
DSL1	YNL258C	ATP7	P30902	174 aa		3	□□□□□ -1.93
DSL1	YNL258C	CAT2	P32796	670 aa	Known RBP	3	□□□□□ -1.93
DSL1	YNL258C	ARN2	P38724	620 aa		3	□□□□□ -1.93
DSL1	YNL258C	BMT5	P40493	336 aa		3	□□□□□ -1.93
DSL1	YNL258C	NUP57	P48837	541 aa		3	□□□□□ -1.93
DSL1	YNL258C	PRP24	P49960	444 aa	Known RBP	3	□□□□□ -1.93
DSL1	YNL258C	YGL039W	P53183	348 aa	Known RBP	3	□□□□□ -1.93
DSL1	YNL258C	YOL029C	Q08187	201 aa		3	□□□□□ -1.93
DSL1	YNL258C	JLP1	Q12358	412 aa		3	□□□□□ -1.93
DSL1	YNL258C	ADH1	P00330	348 aa	Known RBP	2.99	□□□□□ -1.93
DSL1	YNL258C	CAM1	P29547	415 aa	Known RBP	2.99	□□□□□ -1.93
DSL1	YNL258C	YHR127W	P38833	243 aa	Known RBP	2.99	□□□□□ -1.93
DSL1	YNL258C	IRC18	P47056	224 aa		2.99	□□□□□ -1.93
DSL1	YNL258C	FUS2	Q05670	677 aa		2.99	□□□□□ -1.93
DSL1	YNL258C	PIN3	Q06449	215 aa		2.99	□□□□□ -1.93
DSL1	YNL258C	CDD1	Q06549	142 aa		2.99	□□□□□ -1.93
DSL1	YNL258C	YMR316C-A	I2HB70	103 aa		2.99	□□□□□ -1.93
DSL1	YNL258C	RRT13	P40042	185 aa		2.99	□□□□□ -1.93
DSL1	YNL258C	YIL012W	P40551	113 aa		2.99	□□□□□ -1.93
DSL1	YNL258C	BRR6	P53062	197 aa		2.99	□□□□□ -1.93
DSL1	YNL258C	GET1	P53192	235 aa		2.99	□□□□□ -1.93
DSL1	YNL258C	PSK1	P31374	1356 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	RPL27A	P0C2H6	136 aa	Known RBP	2.98	□□□□□ -1.93
DSL1	YNL258C	RPL27B	P0C2H7	136 aa	Known RBP	2.98	□□□□□ -1.93
DSL1	YNL258C	SGE1	P33335	543 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	YHL044W	P38727	235 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	EGD2	P38879	174 aa	Known RBP	2.98	□□□□□ -1.93
DSL1	YNL258C	RHO3	Q00245	231 aa	Known RBP	2.98	□□□□□ -1.93
DSL1	YNL258C	TIM22	Q12328	207 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	IKI3	Q06706	1349 aa	Known RBP	2.98	□□□□□ -1.93
DSL1	YNL258C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
DSL1	YNL258C	YCR087C-A	P37263	153 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	YBL081W	P38180	368 aa	Known RBP	2.98	□□□□□ -1.93
DSL1	YNL258C	PEX17	P40155	199 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	MEP2	P41948	499 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	OSH6	Q02201	448 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	YPL039W	Q03080	316 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	EMI1	Q04406	187 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	PEX10	Q05568	337 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	SYC1	Q08553	188 aa	Predicted RBP	2.98	□□□□□ -1.93
DSL1	YNL258C	MRX4	Q12467	430 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	DNA2	P38859	1522 aa		2.98	□□□□□ -1.93
DSL1	YNL258C	PPH21	P23594	369 aa		2.97	□□□□□ -1.93
DSL1	YNL258C	AVT6	P40074	448 aa		2.97	□□□□□ -1.93
DSL1	YNL258C	SYS1	P41544	203 aa		2.97	□□□□□ -1.93
DSL1	YNL258C	MRPS16	Q02608	121 aa		2.97	□□□□□ -1.93
DSL1	YNL258C	URA6	P15700	204 aa		2.96	□□□□□ -1.93
DSL1	YNL258C	ECM13	P38195	257 aa		2.96	□□□□□ -1.93
DSL1	YNL258C	GPI18	P38211	433 aa		2.96	□□□□□ -1.93
DSL1	YNL258C	YHB1	P39676	399 aa	Known RBP	2.96	□□□□□ -1.93
DSL1	YNL258C	MIC19	P43594	170 aa		2.96	□□□□□ -1.93
DSL1	YNL258C	YPR147C	Q06522	304 aa	Known RBP	2.96	□□□□□ -1.93
DSL1	YNL258C	RRP40	Q08285	240 aa	Known RBP	2.96	□□□□□ -1.93
DSL1	YNL258C	SLX1	P38324	304 aa		2.96	□□□□□ -1.94
DSL1	YNL258C	EDC2	P40023	145 aa	Predicted RBP	2.96	□□□□□ -1.94
DSL1	YNL258C	YIL001W	P40560	513 aa		2.96	□□□□□ -1.94
DSL1	YNL258C	PET191	Q02772	108 aa		2.96	□□□□□ -1.94
DSL1	YNL258C	YOL163W	P0CF20	169 aa		2.95	□□□□□ -1.94
DSL1	YNL258C	PRE7	P23724	241 aa	Known RBP	2.95	□□□□□ -1.94
DSL1	YNL258C	ASP1	P38986	381 aa	Predicted RBP	2.95	□□□□□ -1.94
DSL1	YNL258C	UFE1	P41834	346 aa		2.95	□□□□□ -1.94
DSL1	YNL258C	PDR17	P53844	350 aa		2.95	□□□□□ -1.94
DSL1	YNL258C	USB1	Q12208	290 aa	Known RBP	2.95	□□□□□ -1.94
DSL1	YNL258C	KOG1	P38873	1557 aa		2.95	□□□□□ -1.94
DSL1	YNL258C	RPL28	P02406	149 aa	Known RBP	2.95	□□□□□ -1.94
DSL1	YNL258C	CBP6	P07253	162 aa	Predicted RBP	2.95	□□□□□ -1.94
DSL1	YNL258C	SEC4	P07560	215 aa	Known RBP	2.95	□□□□□ -1.94
DSL1	YNL258C	DBF2	P22204	572 aa		2.95	□□□□□ -1.94
DSL1	YNL258C	TOM40	P23644	387 aa	Known RBP	2.95	□□□□□ -1.94
DSL1	YNL258C	ERG2	P32352	222 aa		2.95	□□□□□ -1.94
DSL1	YNL258C	COG3	P40094	801 aa		2.95	□□□□□ -1.94
DSL1	YNL258C	EMP46	Q12396	444 aa		2.95	□□□□□ -1.94
DSL1	YNL258C	YGL262W	P53054	175 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	YMR279C	Q03263	540 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	TMC1	Q08422	150 aa	Predicted RBP	2.94	□□□□□ -1.94
DSL1	YNL258C	YNG1	Q08465	219 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	YPR011C	Q12251	326 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	YPL247C	Q12523	523 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	CMC2	Q3E7A4	109 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	YHI9	P38765	294 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	YJR141W	P47172	347 aa	Predicted RBP	2.94	□□□□□ -1.94
DSL1	YNL258C	YGL118C	P53132	145 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	SLX9	P53251	210 aa	Predicted RBP	2.94	□□□□□ -1.94
DSL1	YNL258C	YIP3	P53633	176 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	FYV6	P53913	173 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	GGA1	Q06336	557 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	HEM25	Q07534	307 aa		2.94	□□□□□ -1.94
DSL1	YNL258C	NOT5	Q12514	560 aa	Predicted RBP	2.94	□□□□□ -1.94
DSL1	YNL258C	CDC28	P00546	298 aa	Known RBP	2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms