RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C SMT3Q12306 101 aaKnown RBP3.27□□□□□ -1.89
CUS1YMR240C MRX4Q12467 430 aa3.27□□□□□ -1.89
CUS1YMR240C NUP157P40064 1391 aaKnown RBP3.27□□□□□ -1.89
CUS1YMR240C CDC36P06100 191 aaPredicted RBP3.26□□□□□ -1.89
CUS1YMR240C YKR104WP0CE69 306 aa3.26□□□□□ -1.89
CUS1YMR240C MGM101P32787 269 aaKnown RBP3.26□□□□□ -1.89
CUS1YMR240C GOS1P38736 223 aa3.26□□□□□ -1.89
CUS1YMR240C THO1P40040 218 aaKnown RBP3.26□□□□□ -1.89
CUS1YMR240C YRB2P40517 327 aa3.26□□□□□ -1.89
CUS1YMR240C NIF3P53081 288 aa3.26□□□□□ -1.89
CUS1YMR240C HOP2P53187 214 aa3.26□□□□□ -1.89
CUS1YMR240C RRS1Q08746 203 aaKnown RBP3.26□□□□□ -1.89
CUS1YMR240C ARG80P07249 177 aa3.25□□□□□ -1.89
CUS1YMR240C MATALPHA1P0CY06 175 aa3.25□□□□□ -1.89
CUS1YMR240C HMLALPHA1P0CY07 175 aa3.25□□□□□ -1.89
CUS1YMR240C TEM1P38987 245 aa3.25□□□□□ -1.89
CUS1YMR240C SNZ3P43545 298 aa3.25□□□□□ -1.89
CUS1YMR240C MRH4P53166 561 aa3.25□□□□□ -1.89
CUS1YMR240C NOP13P53883 403 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
CUS1YMR240C BNA7Q04066 261 aa3.25□□□□□ -1.89
CUS1YMR240C YOL019WQ08157 551 aa3.25□□□□□ -1.89
CUS1YMR240C TIM22Q12328 207 aa3.25□□□□□ -1.89
CUS1YMR240C PRM7Q12459 698 aa3.25□□□□□ -1.89
CUS1YMR240C JIP3O13555 125 aa3.24□□□□□ -1.89
CUS1YMR240C TOM40P23644 387 aaKnown RBP3.24□□□□□ -1.89
CUS1YMR240C SFC1P33303 322 aa3.24□□□□□ -1.89
CUS1YMR240C SGE1P33335 543 aa3.24□□□□□ -1.89
CUS1YMR240C YKL075CP36083 450 aa3.24□□□□□ -1.89
CUS1YMR240C MAL32P38158 584 aa3.24□□□□□ -1.89
CUS1YMR240C YJL028WP47062 111 aa3.24□□□□□ -1.89
CUS1YMR240C EFM5P53200 248 aaKnown RBP3.24□□□□□ -1.89
CUS1YMR240C MAL12P53341 584 aa3.24□□□□□ -1.89
CUS1YMR240C SPG4Q04438 115 aa3.24□□□□□ -1.89
CUS1YMR240C YDR124WQ04608 324 aa3.24□□□□□ -1.89
CUS1YMR240C FCF1Q05498 189 aaPredicted RBP3.24□□□□□ -1.89
CUS1YMR240C SPO77Q06134 477 aa3.24□□□□□ -1.89
CUS1YMR240C YPL247CQ12523 523 aa3.24□□□□□ -1.89
CUS1YMR240C HIS3P06633 220 aa3.23□□□□□ -1.89
CUS1YMR240C DPB2P24482 689 aaPredicted RBP3.23□□□□□ -1.89
CUS1YMR240C PPA2P28239 310 aa3.23□□□□□ -1.89
CUS1YMR240C DRE2P36152 348 aa3.23□□□□□ -1.89
CUS1YMR240C MRPL39P36533 70 aa3.23□□□□□ -1.89
CUS1YMR240C RPC17P47076 161 aa3.23□□□□□ -1.89
CUS1YMR240C SNZ2P53824 298 aa3.23□□□□□ -1.89
CUS1YMR240C RHO3Q00245 231 aaKnown RBP3.23□□□□□ -1.89
CUS1YMR240C SNZ1Q03148 297 aa3.23□□□□□ -1.89
CUS1YMR240C EMI1Q04406 187 aa3.23□□□□□ -1.89
CUS1YMR240C YDR114CQ04597 100 aa3.23□□□□□ -1.89
CUS1YMR240C SMD2Q06217 110 aaKnown RBP3.23□□□□□ -1.89
CUS1YMR240C RRP40Q08285 240 aaKnown RBP3.23□□□□□ -1.89
CUS1YMR240C SYC1Q08553 188 aaPredicted RBP3.23□□□□□ -1.89
CUS1YMR240C NOT5Q12514 560 aaPredicted RBP3.23□□□□□ -1.89
CUS1YMR240C NHP6BP11633 99 aaKnown RBP3.22□□□□□ -1.89
CUS1YMR240C PPH21P23594 369 aa3.22□□□□□ -1.89
CUS1YMR240C RPL24BP24000 155 aaKnown RBP3.22□□□□□ -1.89
CUS1YMR240C YCR102CP25608 368 aa3.22□□□□□ -1.89
CUS1YMR240C ECM4P36156 370 aa3.22□□□□□ -1.89
CUS1YMR240C ECM13P38195 257 aa3.22□□□□□ -1.89
CUS1YMR240C YHR127WP38833 243 aaKnown RBP3.22□□□□□ -1.89
CUS1YMR240C YHB1P39676 399 aaKnown RBP3.22□□□□□ -1.89
CUS1YMR240C GOT1Q03554 138 aa3.22□□□□□ -1.89
CUS1YMR240C GET4Q12125 312 aa3.22□□□□□ -1.89
CUS1YMR240C YBL008W-AQ3E821 79 aa3.22□□□□□ -1.89
CUS1YMR240C COQ1P18900 473 aa3.21□□□□□ -1.89
CUS1YMR240C VPS21P36017 210 aaKnown RBP3.21□□□□□ -1.89
CUS1YMR240C SPO73P40031 143 aa3.21□□□□□ -1.89
CUS1YMR240C YGL034CP53186 121 aa3.21□□□□□ -1.89
CUS1YMR240C YMR226CQ05016 267 aaKnown RBP3.21□□□□□ -1.89
CUS1YMR240C PST1Q12355 444 aa3.21□□□□□ -1.89
CUS1YMR240C GDH2P33327 1092 aaKnown RBP3.2□□□□□ -1.9
CUS1YMR240C SSH1P38353 490 aaKnown RBP3.2□□□□□ -1.9
CUS1YMR240C CUE1P38428 203 aa3.2□□□□□ -1.9
CUS1YMR240C YOR186WQ08560 144 aa3.2□□□□□ -1.9
CUS1YMR240C EMP46Q12396 444 aa3.2□□□□□ -1.9
CUS1YMR240C RHO1P06780 209 aaKnown RBP3.19□□□□□ -1.9
CUS1YMR240C MET2P08465 486 aa3.19□□□□□ -1.9
CUS1YMR240C PBN1P25580 416 aa3.19□□□□□ -1.9
CUS1YMR240C RNP1P32385 249 aa3.19□□□□□ -1.9
CUS1YMR240C MDM34P53083 459 aa3.19□□□□□ -1.9
CUS1YMR240C SEI1Q06058 285 aa3.19□□□□□ -1.9
CUS1YMR240C SLD7Q08457 257 aa3.19□□□□□ -1.9
CUS1YMR240C FEX1Q08913 375 aa3.19□□□□□ -1.9
CUS1YMR240C FEX2Q08991 375 aa3.19□□□□□ -1.9
CUS1YMR240C YPR011CQ12251 326 aa3.19□□□□□ -1.9
CUS1YMR240C AGC1Q12482 902 aa3.19□□□□□ -1.9
CUS1YMR240C SEY1Q99287 776 aa3.19□□□□□ -1.9
CUS1YMR240C YPK2P18961 677 aa3.19□□□□□ -1.9
CUS1YMR240C RSA4P25382 515 aaKnown RBP3.19□□□□□ -1.9
CUS1YMR240C RME1P32338 300 aaKnown RBP3.19□□□□□ -1.9
CUS1YMR240C VMA6P32366 345 aaKnown RBP3.19□□□□□ -1.9
CUS1YMR240C RFC4P40339 323 aaKnown RBP3.19□□□□□ -1.9
CUS1YMR240C YGL088WP53151 121 aa3.19□□□□□ -1.9
CUS1YMR240C CMC2Q3E7A4 109 aa3.19□□□□□ -1.9
CUS1YMR240C YER189WP40104 122 aa3.18□□□□□ -1.9
CUS1YMR240C HAM1P47119 197 aaKnown RBP3.18□□□□□ -1.9
CUS1YMR240C YNL046WP53956 172 aa3.18□□□□□ -1.9
CUS1YMR240C YLR126CQ12288 251 aa3.18□□□□□ -1.9
CUS1YMR240C NCB2Q92317 146 aa3.18□□□□□ -1.9
CUS1YMR240C TY1B-DR4Q07793 1604 aa3.17□□□□□ -1.9
CUS1YMR240C IKI3Q06706 1349 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 88.7 ms