RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W COA6Q3E846 104 aa4.77□□□□□ -1.65
SPG4YMR107W TY2A-DR3Q99303 438 aa4.77□□□□□ -1.65
SPG4YMR107W GAL4P04386 881 aa4.76□□□□□ -1.65
SPG4YMR107W RPS21AP0C0V8 87 aaKnown RBP4.76□□□□□ -1.65
SPG4YMR107W POP5P28005 173 aa4.76□□□□□ -1.65
SPG4YMR107W KKQ8P36004 724 aa4.76□□□□□ -1.65
SPG4YMR107W SKN7P38889 622 aa4.76□□□□□ -1.65
SPG4YMR107W SUR2P38992 349 aa4.76□□□□□ -1.65
SPG4YMR107W UIP3P39547 235 aa4.76□□□□□ -1.65
SPG4YMR107W DLS1P40366 167 aa4.76□□□□□ -1.65
SPG4YMR107W LYS12P40495 371 aaKnown RBP4.76□□□□□ -1.65
SPG4YMR107W FET4P40988 552 aa4.76□□□□□ -1.65
SPG4YMR107W SYS1P41544 203 aa4.76□□□□□ -1.65
SPG4YMR107W YGR149WP48236 432 aa4.76□□□□□ -1.65
SPG4YMR107W UBP8P50102 471 aa4.76□□□□□ -1.65
SPG4YMR107W UBC9P50623 157 aaPredicted RBP4.76□□□□□ -1.65
SPG4YMR107W MGA1P53050 456 aa4.76□□□□□ -1.65
SPG4YMR107W YIP4P53093 235 aa4.76□□□□□ -1.65
SPG4YMR107W ALG9P53868 555 aaKnown RBP4.76□□□□□ -1.65
SPG4YMR107W SKO1Q02100 647 aa4.76□□□□□ -1.65
SPG4YMR107W PIR1Q03178 341 aa4.76□□□□□ -1.65
SPG4YMR107W ADD37Q03233 198 aa4.76□□□□□ -1.65
SPG4YMR107W RCR2Q03446 210 aaKnown RBP4.76□□□□□ -1.65
SPG4YMR107W TMA23Q03525 211 aa4.76□□□□□ -1.65
SPG4YMR107W TAZ1Q06510 381 aa4.76□□□□□ -1.65
SPG4YMR107W REX4Q08237 289 aa4.76□□□□□ -1.65
SPG4YMR107W YOR365CQ08844 703 aa4.76□□□□□ -1.65
SPG4YMR107W RDR1Q08904 546 aa4.76□□□□□ -1.65
SPG4YMR107W RAX2Q12465 1220 aa4.76□□□□□ -1.65
SPG4YMR107W MEX67Q99257 599 aaKnown RBP4.76□□□□□ -1.65
SPG4YMR107W ILV5P06168 395 aaKnown RBP4.75□□□□□ -1.65
SPG4YMR107W YSR3P23501 404 aa4.75□□□□□ -1.65
SPG4YMR107W YCR025CP25352 136 aa4.75□□□□□ -1.65
SPG4YMR107W PPZ2P33329 710 aa4.75□□□□□ -1.65
SPG4YMR107W YKL102CP34249 101 aa4.75□□□□□ -1.65
SPG4YMR107W MRPL4P36517 319 aa4.75□□□□□ -1.65
SPG4YMR107W FLO5P38894 1075 aa4.75□□□□□ -1.65
SPG4YMR107W PNT1P38969 423 aa4.75□□□□□ -1.65
SPG4YMR107W MET30P39014 640 aa4.75□□□□□ -1.65
SPG4YMR107W RMD9P53140 646 aaKnown RBP4.75□□□□□ -1.65
SPG4YMR107W CDH1P53197 566 aa4.75□□□□□ -1.65
SPG4YMR107W MTM1P53320 366 aa4.75□□□□□ -1.65
SPG4YMR107W YNR014WP53719 212 aa4.75□□□□□ -1.65
SPG4YMR107W ACT1P60010 375 aaKnown RBP4.75□□□□□ -1.65
SPG4YMR107W YVH1Q02256 364 aaKnown RBP4.75□□□□□ -1.65
SPG4YMR107W ARG7Q04728 441 aa4.75□□□□□ -1.65
SPG4YMR107W YMR315WQ04869 349 aaKnown RBP4.75□□□□□ -1.65
SPG4YMR107W ATG38Q05789 226 aaKnown RBP4.75□□□□□ -1.65
SPG4YMR107W MSC3Q05812 728 aa4.75□□□□□ -1.65
SPG4YMR107W FRQ1Q06389 190 aa4.75□□□□□ -1.65
SPG4YMR107W RFU1Q08003 200 aa4.75□□□□□ -1.65
SPG4YMR107W YDL177CQ12257 170 aa4.75□□□□□ -1.65
SPG4YMR107W SKS1Q12505 502 aa4.75□□□□□ -1.65
SPG4YMR107W YDL007C-AQ2V2Q0 85 aa4.75□□□□□ -1.65
SPG4YMR107W TMA7Q3E764 64 aaKnown RBP4.75□□□□□ -1.65
SPG4YMR107W ADH2P00331 348 aaKnown RBP4.74□□□□□ -1.65
SPG4YMR107W RIP1P08067 215 aa4.74□□□□□ -1.65
SPG4YMR107W RPS25BP0C0T4 108 aaKnown RBP4.74□□□□□ -1.65
SPG4YMR107W YPR170W-BP0C5R9 85 aa4.74□□□□□ -1.65
SPG4YMR107W RPB10P22139 70 aa4.74□□□□□ -1.65
SPG4YMR107W MSN1P22148 382 aa4.74□□□□□ -1.65
SPG4YMR107W GEX1P25596 615 aa4.74□□□□□ -1.65
SPG4YMR107W PRP18P33411 251 aaPredicted RBP4.74□□□□□ -1.65
SPG4YMR107W SOF1P33750 489 aaKnown RBP4.74□□□□□ -1.65
SPG4YMR107W MOT2P34909 587 aaKnown RBP4.74□□□□□ -1.65
SPG4YMR107W GMH1P36125 273 aa4.74□□□□□ -1.65
SPG4YMR107W GEX2P36173 615 aa4.74□□□□□ -1.65
SPG4YMR107W MRPS9P38120 278 aa4.74□□□□□ -1.65
SPG4YMR107W DBP8P38719 431 aa4.74□□□□□ -1.65
SPG4YMR107W VPS52P39904 641 aa4.74□□□□□ -1.65
SPG4YMR107W VAC8P39968 578 aa4.74□□□□□ -1.65
SPG4YMR107W SMB1P40018 196 aaKnown RBP4.74□□□□□ -1.65
SPG4YMR107W MET28P40573 187 aa4.74□□□□□ -1.65
SPG4YMR107W UFE1P41834 346 aa4.74□□□□□ -1.65
SPG4YMR107W HXT14P42833 540 aa4.74□□□□□ -1.65
SPG4YMR107W COX16P47081 118 aa4.74□□□□□ -1.65
SPG4YMR107W ABM1P47146 123 aa4.74□□□□□ -1.65
SPG4YMR107W ASK10P48361 1146 aa4.74□□□□□ -1.65
SPG4YMR107W PUS4P48567 403 aaKnown RBP4.74□□□□□ -1.65
SPG4YMR107W YGL101WP53144 215 aa4.74□□□□□ -1.65
SPG4YMR107W COG7P53195 279 aa4.74□□□□□ -1.65
SPG4YMR107W YAP1802P53309 568 aa4.74□□□□□ -1.65
SPG4YMR107W RBS1Q05672 457 aaKnown RBP4.74□□□□□ -1.65
SPG4YMR107W YLR225CQ05948 407 aaKnown RBP4.74□□□□□ -1.65
SPG4YMR107W TDA6Q06466 467 aa4.74□□□□□ -1.65
SPG4YMR107W HDA2Q06629 674 aa4.74□□□□□ -1.65
SPG4YMR107W YDL211CQ12121 372 aa4.74□□□□□ -1.65
SPG4YMR107W YOR114WQ12219 294 aa4.74□□□□□ -1.65
SPG4YMR107W ORT1Q12375 292 aa4.74□□□□□ -1.65
SPG4YMR107W LAS17Q12446 633 aa4.74□□□□□ -1.65
SPG4YMR107W RPS25AQ3E792 108 aaPredicted RBP4.74□□□□□ -1.65
SPG4YMR107W CCH1P50077 2039 aa4.73□□□□□ -1.65
SPG4YMR107W YLR358CO13565 187 aa4.73□□□□□ -1.65
SPG4YMR107W TDH3P00359 332 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
SPG4YMR107W CPR1P14832 162 aaKnown RBP4.73□□□□□ -1.65
SPG4YMR107W BGL2P15703 313 aaKnown RBP4.73□□□□□ -1.65
SPG4YMR107W ERS1P17261 260 aa4.73□□□□□ -1.65
SPG4YMR107W SNF5P18480 905 aa4.73□□□□□ -1.65
SPG4YMR107W LSB5P25369 354 aa4.73□□□□□ -1.65
SPG4YMR107W SPS19P32573 292 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms