RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	SCEI	P03882	235 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	RPS3	P05750	240 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	RPL31A	P0C2H8	113 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	RPL12A	P0CX53	165 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	RPL12B	P0CX54	165 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	PET54	P10834	293 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	PET9	P18239	318 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	ARF2	P19146	181 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	BMH1	P29311	267 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	KAR9	P32526	644 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	SDH4	P37298	181 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	OLA1	P38219	394 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	GOS1	P38736	223 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	YRB1	P41920	201 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	YJR011C	P47086	261 aa	Predicted RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	TOM22	P49334	152 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	SLI1	P53304	468 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	CUS2	P53830	285 aa	Predicted RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	ARP10	Q04549	284 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	YLR031W	Q07978	186 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	TIM18	Q08749	192 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	YCL012C	Q8J0M4	134 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	RPL24B	P24000	155 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	SEC1	P30619	724 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	YBR096W	P38256	230 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	APD1	P38281	316 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	JLP2	P40206	208 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	BMT5	P40493	336 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	CUP9	P41817	306 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	BIO4	P53630	237 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	HST4	P53688	370 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	YDR248C	Q03786	193 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	VBA1	Q04301	562 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	PEX30	Q06169	523 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	YOL014W	Q08110	124 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	MIM1	Q08176	113 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	BBP1	Q12365	385 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	RPN6	Q12377	434 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	YPR064W	Q12492	139 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	NUP2	P32499	720 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	MSA2	P36157	363 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	GLE2	P40066	365 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	RRG9	P40156	214 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	YIL086C	P40503	102 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	AGE2	P40529	298 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	PSA1	P41940	361 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	GLG2	P47011	380 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	YLR152C	P54072	576 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	RRP17	Q04031	235 aa	Predicted RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	FSH2	Q05015	223 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	YPR098C	Q06089	161 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	SDO1	Q07953	250 aa	Known RBP	0.99	□□□□□ -2.25
CLU1	YMR012W	FRE8	Q12209	686 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	YOS9	Q99220	542 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	SEY1	Q99287	776 aa		0.99	□□□□□ -2.25
CLU1	YMR012W	NAM9	P27929	486 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	TRM7	P38238	310 aa	Known RBP	0.98	□□□□□ -2.25
CLU1	YMR012W	AME1	P38313	324 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	LSM4	P40070	187 aa	Known RBP	0.98	□□□□□ -2.25
CLU1	YMR012W	CFD1	P40558	293 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	RTS2	P40962	232 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	OTU1	P43558	301 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	CIN2	P46670	268 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	SBH1	P52870	82 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	MMS2	P53152	137 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	FMP41	P53889	259 aa	Known RBP	0.98	□□□□□ -2.25
CLU1	YMR012W	SMX3	P54999	86 aa	Predicted RBP	0.98	□□□□□ -2.25
CLU1	YMR012W	TIM44	Q01852	431 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	ECM11	Q04110	302 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	APC4	Q04601	652 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	YLR177W	Q06251	628 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	RFU1	Q08003	200 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	GTT2	Q12390	233 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	YLR111W	Q12528	110 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	NCB2	Q92317	146 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	YHR139C-A	O13536	103 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	RPL23A	P0CX41	137 aa	Known RBP	0.98	□□□□□ -2.25
CLU1	YMR012W	RPL23B	P0CX42	137 aa	Known RBP	0.98	□□□□□ -2.25
CLU1	YMR012W	DCC1	P25559	380 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	VMA6	P32366	345 aa	Known RBP	0.98	□□□□□ -2.25
CLU1	YMR012W	UBC6	P33296	250 aa	Predicted RBP	0.98	□□□□□ -2.25
CLU1	YMR012W	SEC66	P33754	206 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	YHL037C	P38733	133 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	THO1	P40040	218 aa	Known RBP	0.98	□□□□□ -2.25
CLU1	YMR012W	RPL10	P41805	221 aa	Known RBP	0.98	□□□□□ -2.25
CLU1	YMR012W	YFR054C	P43622	192 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	HOC1	P47124	396 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	VHT1	P53241	593 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	MKC7	P53379	596 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	YNR048W	P53740	393 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	EMP46	Q12396	444 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	CYC3	P06182	269 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	ROX3	P25046	220 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	PET18	P25362	215 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	HSP30	P25619	332 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	IST2	P38250	946 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	CUE1	P38428	203 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	ECM14	P38836	430 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	UIP3	P39547	235 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	OXA1	P39952	402 aa		0.98	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms