RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W PFA5Q03289 374 aa3.16□□□□□ -1.9
LCB5YLR260W YMR034CQ05131 434 aaPredicted RBP3.16□□□□□ -1.9
LCB5YLR260W POM33Q12164 279 aa3.16□□□□□ -1.9
LCB5YLR260W YPL245WQ12179 454 aaKnown RBP3.16□□□□□ -1.9
LCB5YLR260W RGT2Q12300 763 aa3.16□□□□□ -1.9
LCB5YLR260W RPN6Q12377 434 aa3.16□□□□□ -1.9
LCB5YLR260W YKL033W-AQ86ZR7 236 aa3.16□□□□□ -1.9
LCB5YLR260W FAS1P07149 2051 aaKnown RBP3.16□□□□□ -1.9
LCB5YLR260W HEM2P05373 342 aa3.16□□□□□ -1.9
LCB5YLR260W RPS28BP0C0X0 67 aaKnown RBP3.16□□□□□ -1.9
LCB5YLR260W CTS1P29029 562 aa3.16□□□□□ -1.9
LCB5YLR260W ACB1P31787 87 aa3.16□□□□□ -1.9
LCB5YLR260W YKL187CP34231 750 aa3.16□□□□□ -1.9
LCB5YLR260W FLO10P36170 1169 aa3.16□□□□□ -1.9
LCB5YLR260W PHO89P38361 574 aa3.16□□□□□ -1.9
LCB5YLR260W TDA11P38854 504 aa3.16□□□□□ -1.9
LCB5YLR260W DHH1P39517 506 aaKnown RBP3.16□□□□□ -1.9
LCB5YLR260W SMB1P40018 196 aaKnown RBP3.16□□□□□ -1.9
LCB5YLR260W HPM1P40481 377 aa3.16□□□□□ -1.9
LCB5YLR260W COS4P43542 379 aa3.16□□□□□ -1.9
LCB5YLR260W YJR030CP47101 745 aa3.16□□□□□ -1.9
LCB5YLR260W TRM9P49957 279 aa3.16□□□□□ -1.9
LCB5YLR260W MUP1P50276 574 aa3.16□□□□□ -1.9
LCB5YLR260W LST7P53237 242 aa3.16□□□□□ -1.9
LCB5YLR260W YGR151CP53287 111 aa3.16□□□□□ -1.9
LCB5YLR260W GPI15P53961 229 aa3.16□□□□□ -1.9
LCB5YLR260W ARC18Q05933 178 aaKnown RBP3.16□□□□□ -1.9
LCB5YLR260W YLR177WQ06251 628 aa3.16□□□□□ -1.9
LCB5YLR260W YPL199CQ08954 240 aa3.16□□□□□ -1.9
LCB5YLR260W USV1Q12132 391 aa3.16□□□□□ -1.9
LCB5YLR260W RKI1Q12189 258 aa3.16□□□□□ -1.9
LCB5YLR260W SFM1Q12314 213 aa3.16□□□□□ -1.9
LCB5YLR260W RPS28AQ3E7X9 67 aaPredicted RBP3.16□□□□□ -1.9
LCB5YLR260W PRP8P33334 2413 aaKnown RBP3.16□□□□□ -1.9
LCB5YLR260W MDM35O60200 86 aa3.15□□□□□ -1.9
LCB5YLR260W SPT3P06844 337 aa3.15□□□□□ -1.9
LCB5YLR260W ZWF1P11412 505 aaKnown RBP3.15□□□□□ -1.9
LCB5YLR260W SAC1P32368 623 aaKnown RBP3.15□□□□□ -1.9
LCB5YLR260W APE2P32454 952 aaKnown RBP3.15□□□□□ -1.9
LCB5YLR260W TCA17P32613 152 aa3.15□□□□□ -1.9
LCB5YLR260W ZRT1P32804 376 aa3.15□□□□□ -1.9
LCB5YLR260W SRL3P36167 246 aa3.15□□□□□ -1.9
LCB5YLR260W CBP4P37267 147 aa3.15□□□□□ -1.9
LCB5YLR260W SHG1P38337 142 aa3.15□□□□□ -1.9
LCB5YLR260W COG3P40094 801 aa3.15□□□□□ -1.9
LCB5YLR260W YIL152WP40455 235 aa3.15□□□□□ -1.9
LCB5YLR260W YNL095CP53932 642 aa3.15□□□□□ -1.9
LCB5YLR260W YPL077CQ02831 240 aa3.15□□□□□ -1.9
LCB5YLR260W BCH1Q05029 724 aa3.15□□□□□ -1.9
LCB5YLR260W YPL225WQ08971 146 aaKnown RBP3.15□□□□□ -1.9
LCB5YLR260W AKR2Q12013 749 aa3.15□□□□□ -1.9
LCB5YLR260W DCN1Q12395 269 aa3.15□□□□□ -1.9
LCB5YLR260W MHT1Q12525 324 aa3.15□□□□□ -1.9
LCB5YLR260W CDC8P00572 216 aa3.15□□□□□ -1.91
LCB5YLR260W RPL28P02406 149 aaKnown RBP3.15□□□□□ -1.91
LCB5YLR260W TPK3P05986 398 aa3.15□□□□□ -1.91
LCB5YLR260W TRP4P07285 380 aaPredicted RBP3.15□□□□□ -1.91
LCB5YLR260W PET54P10834 293 aa3.15□□□□□ -1.91
LCB5YLR260W DPM1P14020 267 aaKnown RBP3.15□□□□□ -1.91
LCB5YLR260W CPR4P25334 318 aa3.15□□□□□ -1.91
LCB5YLR260W TRX3P25372 127 aa3.15□□□□□ -1.91
LCB5YLR260W POF1P25576 258 aa3.15□□□□□ -1.91
LCB5YLR260W LDB16P25587 256 aa3.15□□□□□ -1.91
LCB5YLR260W UBC8P28263 218 aa3.15□□□□□ -1.91
LCB5YLR260W FUN26P31381 517 aa3.15□□□□□ -1.91
LCB5YLR260W MDH3P32419 343 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
LCB5YLR260W PHA2P32452 334 aa3.15□□□□□ -1.91
LCB5YLR260W APL3P38065 1025 aa3.15□□□□□ -1.91
LCB5YLR260W YBR241CP38142 488 aa3.15□□□□□ -1.91
LCB5YLR260W FAA2P39518 744 aa3.15□□□□□ -1.91
LCB5YLR260W RIO2P40160 425 aaKnown RBP3.15□□□□□ -1.91
LCB5YLR260W YCH1P42937 148 aa3.15□□□□□ -1.91
LCB5YLR260W MIC26P50087 233 aa3.15□□□□□ -1.91
LCB5YLR260W PHO23P50947 330 aa3.15□□□□□ -1.91
LCB5YLR260W MDM34P53083 459 aa3.15□□□□□ -1.91
LCB5YLR260W GTR2P53290 341 aa3.15□□□□□ -1.91
LCB5YLR260W IBD2P53892 351 aa3.15□□□□□ -1.91
LCB5YLR260W RSM10Q03201 203 aa3.15□□□□□ -1.91
LCB5YLR260W GAS3Q03655 524 aa3.15□□□□□ -1.91
LCB5YLR260W IRC13Q08630 104 aa3.15□□□□□ -1.91
LCB5YLR260W MMT2Q08970 484 aa3.15□□□□□ -1.91
LCB5YLR260W NSL1Q12143 216 aa3.15□□□□□ -1.91
LCB5YLR260W YPR011CQ12251 326 aa3.15□□□□□ -1.91
LCB5YLR260W RRP42Q12277 265 aaPredicted RBP3.15□□□□□ -1.91
LCB5YLR260W CBP6P07253 162 aaPredicted RBP3.14□□□□□ -1.91
LCB5YLR260W RPL31AP0C2H8 113 aaKnown RBP3.14□□□□□ -1.91
LCB5YLR260W BAR1P12630 587 aa3.14□□□□□ -1.91
LCB5YLR260W HSP30P25619 332 aa3.14□□□□□ -1.91
LCB5YLR260W MKK1P32490 508 aa3.14□□□□□ -1.91
LCB5YLR260W YBL010CP32788 280 aa3.14□□□□□ -1.91
LCB5YLR260W UPS2P35200 230 aa3.14□□□□□ -1.91
LCB5YLR260W MRPL15P36523 253 aa3.14□□□□□ -1.91
LCB5YLR260W CUE1P38428 203 aa3.14□□□□□ -1.91
LCB5YLR260W GOS1P38736 223 aa3.14□□□□□ -1.91
LCB5YLR260W SEN34P39707 275 aa3.14□□□□□ -1.91
LCB5YLR260W BDH1P39714 382 aa3.14□□□□□ -1.91
LCB5YLR260W PHB2P50085 310 aa3.14□□□□□ -1.91
LCB5YLR260W YGL260WP53056 76 aa3.14□□□□□ -1.91
LCB5YLR260W MTM1P53320 366 aa3.14□□□□□ -1.91
LCB5YLR260W SMM1P53720 384 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 92.4 ms