RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C TRM44Q02648 567 aaKnown RBP1.75□□□□□ -2.13
ATG38YLR211C LOA1Q06508 300 aa1.75□□□□□ -2.13
ATG38YLR211C PLB3Q08108 686 aa1.75□□□□□ -2.13
ATG38YLR211C RRS1Q08746 203 aaKnown RBP1.75□□□□□ -2.13
ATG38YLR211C YPL278CQ08990 100 aa1.75□□□□□ -2.13
ATG38YLR211C YCT1Q12235 531 aa1.75□□□□□ -2.13
ATG38YLR211C SME1Q12330 94 aaPredicted RBP1.75□□□□□ -2.13
ATG38YLR211C STH1P32597 1359 aa1.74□□□□□ -2.13
ATG38YLR211C HIS3P06633 220 aa1.74□□□□□ -2.13
ATG38YLR211C YCR102CP25608 368 aa1.74□□□□□ -2.13
ATG38YLR211C ATG15P25641 520 aa1.74□□□□□ -2.13
ATG38YLR211C EHD3P28817 500 aa1.74□□□□□ -2.13
ATG38YLR211C AEP1P32493 518 aa1.74□□□□□ -2.13
ATG38YLR211C ARC19P33204 171 aaKnown RBP1.74□□□□□ -2.13
ATG38YLR211C TAF14P35189 244 aa1.74□□□□□ -2.13
ATG38YLR211C CAB3P36076 571 aa1.74□□□□□ -2.13
ATG38YLR211C HEK2P38199 381 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
ATG38YLR211C SHC1P39000 512 aa1.74□□□□□ -2.13
ATG38YLR211C YIL012WP40551 113 aa1.74□□□□□ -2.13
ATG38YLR211C YFL064CP43540 174 aa1.74□□□□□ -2.13
ATG38YLR211C NBP35P52920 328 aa1.74□□□□□ -2.13
ATG38YLR211C MIG2P53035 382 aa1.74□□□□□ -2.13
ATG38YLR211C LIF1P53150 421 aa1.74□□□□□ -2.13
ATG38YLR211C ALG13P53178 202 aa1.74□□□□□ -2.13
ATG38YLR211C SWS2P53937 143 aa1.74□□□□□ -2.13
ATG38YLR211C VPS60Q03390 229 aa1.74□□□□□ -2.13
ATG38YLR211C YML018CQ03730 393 aa1.74□□□□□ -2.13
ATG38YLR211C YMR226CQ05016 267 aaKnown RBP1.74□□□□□ -2.13
ATG38YLR211C CDC123Q05791 360 aa1.74□□□□□ -2.13
ATG38YLR211C ARC18Q05933 178 aaKnown RBP1.74□□□□□ -2.13
ATG38YLR211C SEC10Q06245 871 aa1.74□□□□□ -2.13
ATG38YLR211C CSM4Q08955 156 aa1.74□□□□□ -2.13
ATG38YLR211C GRE1Q08969 168 aa1.74□□□□□ -2.13
ATG38YLR211C AI5_BETAQ9ZZX0 354 aa1.74□□□□□ -2.13
ATG38YLR211C SIR4P11978 1358 aa1.73□□□□□ -2.13
ATG38YLR211C HTB1P02293 131 aaKnown RBP1.73□□□□□ -2.13
ATG38YLR211C HTB2P02294 131 aa1.73□□□□□ -2.13
ATG38YLR211C RPL27AP0C2H6 136 aaKnown RBP1.73□□□□□ -2.13
ATG38YLR211C RPL27BP0C2H7 136 aaKnown RBP1.73□□□□□ -2.13
ATG38YLR211C CDC10P25342 322 aaKnown RBP1.73□□□□□ -2.13
ATG38YLR211C IDH1P28834 360 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
ATG38YLR211C ECM4P36156 370 aa1.73□□□□□ -2.13
ATG38YLR211C MBA1P38300 278 aa1.73□□□□□ -2.13
ATG38YLR211C CUE1P38428 203 aa1.73□□□□□ -2.13
ATG38YLR211C SEN34P39707 275 aa1.73□□□□□ -2.13
ATG38YLR211C COX15P40086 486 aa1.73□□□□□ -2.13
ATG38YLR211C DSN1P40568 576 aa1.73□□□□□ -2.13
ATG38YLR211C YRB1P41920 201 aaKnown RBP1.73□□□□□ -2.13
ATG38YLR211C RMR1P53060 241 aa1.73□□□□□ -2.13
ATG38YLR211C NIF3P53081 288 aa1.73□□□□□ -2.13
ATG38YLR211C NOP19P53317 196 aaPredicted RBP1.73□□□□□ -2.13
ATG38YLR211C SNZ2P53824 298 aa1.73□□□□□ -2.13
ATG38YLR211C RHO3Q00245 231 aaKnown RBP1.73□□□□□ -2.13
ATG38YLR211C YPR098CQ06089 161 aa1.73□□□□□ -2.13
ATG38YLR211C VPS68Q12016 184 aa1.73□□□□□ -2.13
ATG38YLR211C YLR126CQ12288 251 aa1.73□□□□□ -2.13
ATG38YLR211C YCL012CQ8J0M4 134 aa1.73□□□□□ -2.13
ATG38YLR211C YMR316C-AI2HB70 103 aa1.72□□□□□ -2.13
ATG38YLR211C YAL064W-BO13512 126 aa1.72□□□□□ -2.13
ATG38YLR211C RPL28P02406 149 aaKnown RBP1.72□□□□□ -2.13
ATG38YLR211C RPL4AP10664 362 aaKnown RBP1.72□□□□□ -2.13
ATG38YLR211C ZWF1P11412 505 aaKnown RBP1.72□□□□□ -2.13
ATG38YLR211C IFM1P25038 676 aa1.72□□□□□ -2.13
ATG38YLR211C RFA3P26755 122 aaKnown RBP1.72□□□□□ -2.13
ATG38YLR211C IMP1P28627 190 aa1.72□□□□□ -2.13
ATG38YLR211C PEX3P28795 441 aa1.72□□□□□ -2.13
ATG38YLR211C CLB6P32943 380 aa1.72□□□□□ -2.13
ATG38YLR211C NTF2P33331 125 aaKnown RBP1.72□□□□□ -2.13
ATG38YLR211C SGE1P33335 543 aa1.72□□□□□ -2.13
ATG38YLR211C YHL049CP38722 271 aa1.72□□□□□ -2.13
ATG38YLR211C GOS1P38736 223 aa1.72□□□□□ -2.13
ATG38YLR211C SNZ3P43545 298 aa1.72□□□□□ -2.13
ATG38YLR211C ADO1P47143 340 aaKnown RBP1.72□□□□□ -2.13
ATG38YLR211C RPL4BP49626 362 aaKnown RBP1.72□□□□□ -2.13
ATG38YLR211C TRM9P49957 279 aa1.72□□□□□ -2.13
ATG38YLR211C ALG9P53868 555 aaKnown RBP1.72□□□□□ -2.13
ATG38YLR211C FMP41P53889 259 aaKnown RBP1.72□□□□□ -2.13
ATG38YLR211C CGI121Q03705 181 aaKnown RBP1.72□□□□□ -2.13
ATG38YLR211C YMR166CQ03829 368 aa1.72□□□□□ -2.13
ATG38YLR211C PEX10Q05568 337 aa1.72□□□□□ -2.13
ATG38YLR211C RDS3Q06835 107 aaPredicted RBP1.72□□□□□ -2.13
ATG38YLR211C SNU23Q12368 194 aaPredicted RBP1.72□□□□□ -2.13
ATG38YLR211C NCB2Q92317 146 aa1.72□□□□□ -2.13
ATG38YLR211C QCR7P00128 127 aa1.71□□□□□ -2.14
ATG38YLR211C PPH21P23594 369 aa1.71□□□□□ -2.14
ATG38YLR211C ADE1P27616 306 aa1.71□□□□□ -2.14
ATG38YLR211C YHR127WP38833 243 aaKnown RBP1.71□□□□□ -2.14
ATG38YLR211C YHB1P39676 399 aaKnown RBP1.71□□□□□ -2.14
ATG38YLR211C KRE29P40026 464 aa1.71□□□□□ -2.14
ATG38YLR211C YJR146WP47174 117 aa1.71□□□□□ -2.14
ATG38YLR211C MGA1P53050 456 aa1.71□□□□□ -2.14
ATG38YLR211C COG7P53195 279 aa1.71□□□□□ -2.14
ATG38YLR211C MRS2Q01926 470 aa1.71□□□□□ -2.14
ATG38YLR211C YMR114CQ04471 368 aaKnown RBP1.71□□□□□ -2.14
ATG38YLR211C FAR8Q05040 523 aa1.71□□□□□ -2.14
ATG38YLR211C HEM25Q07534 307 aa1.71□□□□□ -2.14
ATG38YLR211C COQ10Q08058 207 aa1.71□□□□□ -2.14
ATG38YLR211C ABP140Q08641 628 aaKnown RBP1.71□□□□□ -2.14
ATG38YLR211C TUS1Q06412 1307 aa1.7□□□□□ -2.14
ATG38YLR211C IKI3Q06706 1349 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms