RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABF1	YKL112W	YIL165C	P40446	119 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	AVT4	P50944	713 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	FRE4	P53746	719 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	NRG1	Q03125	231 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	SEI1	Q06058	285 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	MCH1	Q07376	486 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	ECM3	Q99252	613 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	Q0142	Q9ZZW4	58 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	REP2	P03872	296 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	ADK1	P07170	222 aa	Known RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	ERG11	P10614	530 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	MRP49	P32388	137 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	YNK1	P36010	153 aa	Known RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	YBR056W	P38081	501 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	DOG2	P38773	246 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	SSN3	P39073	555 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	PRE6	P40303	254 aa	Known RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	AZF1	P41696	914 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	MIC19	P43594	170 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	ASN1	P49089	572 aa	Known RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	LGE1	Q02796	332 aa	Known RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	GOT1	Q03554	138 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	FMN1	Q03778	218 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	TRM12	Q04235	462 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	YMR320W	Q04897	101 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	TDA6	Q06466	467 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	WTM2	Q12206	467 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	RLM1	Q12224	676 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	RDL1	Q12305	139 aa	Known RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	RAX2	Q12465	1220 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	AIM45	Q12480	344 aa	Known RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	YLR099W-A	Q3E798	87 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	GPM1	P00950	247 aa	Known RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	RPL11A	P0C0W9	174 aa	Known RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	GRX2	P17695	143 aa	Known RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	BUB2	P26448	306 aa	Predicted RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	YKL075C	P36083	450 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	ERV15	P38312	142 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	TSL1	P38427	1098 aa	Known RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	NSE4	P43124	402 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	DIE2	P50076	525 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	PYK2	P52489	506 aa	Known RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	YIP1	P53039	248 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	VEL1	P53058	206 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	MMS2	P53152	137 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	ALG13	P53178	202 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	HST3	P53687	447 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	IDP3	P53982	420 aa	Known RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	IRC15	Q02733	499 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	YMR187C	Q03236	431 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	SCS7	Q03529	384 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	LRS4	Q04087	347 aa	Known RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	YTH1	Q06102	208 aa	Predicted RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	NKP2	Q06162	153 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	YDL177C	Q12257	170 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	YDL199C	Q12407	687 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	RPL11B	Q3E757	174 aa	Predicted RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	COX3	P00420	269 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	COR1	P07256	457 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	FCY2	P17064	533 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	POF1	P25576	258 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	COQ3	P27680	312 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	APE2	P32454	952 aa	Known RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	TKL2	P33315	681 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	PAN3	P36102	679 aa	Predicted RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	OMA1	P36163	345 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	IST2	P38250	946 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	YEA6	P39953	335 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	SNU13	P39990	126 aa	Known RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	YDL186W	P48568	277 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	MNN10	P50108	393 aa	Known RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	MKC7	P53379	596 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	NRM1	P53718	249 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	SED5	Q01590	340 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	OSH6	Q02201	448 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	YPL108W	Q02872	168 aa	Predicted RBP	4.19	□□□□□ -1.74
ABF1	YKL112W	AIM36	Q03798	255 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	SHH3	Q04487	196 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	YOR387C	Q08910	206 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	FRE8	Q12209	686 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	ATP14	Q12349	124 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	YLR149C	Q99296	730 aa		4.19	□□□□□ -1.74
ABF1	YKL112W	GAL10	P04397	699 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	RPL9A	P05738	191 aa	Known RBP	4.18	□□□□□ -1.74
ABF1	YKL112W	YCL002C	P25565	263 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	STP22	P25604	385 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	MSK1	P32048	576 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	SPS18	P32572	300 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	SFK1	P35735	353 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	YOR062C	P36025	268 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	YBR013C	P38215	129 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	YHR177W	P38867	453 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	KRE29	P40026	464 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	VFA1	P40080	203 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	LYS12	P40495	371 aa	Known RBP	4.18	□□□□□ -1.74
ABF1	YKL112W	GLR1	P41921	483 aa	Known RBP	4.18	□□□□□ -1.74
ABF1	YKL112W	RPL9B	P51401	191 aa	Known RBP	4.18	□□□□□ -1.74
ABF1	YKL112W	EXG2	P52911	562 aa		4.18	□□□□□ -1.74
ABF1	YKL112W	STR3	P53101	465 aa	Known RBP	4.18	□□□□□ -1.74
ABF1	YKL112W	CDH1	P53197	566 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 148.9 ms