RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C MRPS17Q03246 237 aaPredicted RBP1.89□□□□□ -2.11
UFD4YKL010C THI73Q07904 523 aa1.89□□□□□ -2.11
UFD4YKL010C YLR365WQ7LIF2 110 aa1.89□□□□□ -2.11
UFD4YKL010C PET20Q99373 253 aa1.89□□□□□ -2.11
UFD4YKL010C TRA1P38811 3744 aa1.89□□□□□ -2.11
UFD4YKL010C RFA1P22336 621 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C PRE2P30656 287 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C ECM25P32525 599 aa1.89□□□□□ -2.11
UFD4YKL010C SHG1P38337 142 aa1.89□□□□□ -2.11
UFD4YKL010C MGE1P38523 228 aa1.89□□□□□ -2.11
UFD4YKL010C UTP25P40498 721 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C GTT1P40582 234 aa1.89□□□□□ -2.11
UFD4YKL010C HAM1P47119 197 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C MSY1P48527 492 aa1.89□□□□□ -2.11
UFD4YKL010C PHB2P50085 310 aa1.89□□□□□ -2.11
UFD4YKL010C TIM21P53220 239 aa1.89□□□□□ -2.11
UFD4YKL010C VHT1P53241 593 aa1.89□□□□□ -2.11
UFD4YKL010C MRPL19P53875 158 aa1.89□□□□□ -2.11
UFD4YKL010C YCL001W-AP87012 153 aa1.89□□□□□ -2.11
UFD4YKL010C YMR253CQ04835 414 aa1.89□□□□□ -2.11
UFD4YKL010C YCT1Q12235 531 aa1.89□□□□□ -2.11
UFD4YKL010C CTA1P15202 515 aa1.89□□□□□ -2.11
UFD4YKL010C URA6P15700 204 aa1.89□□□□□ -2.11
UFD4YKL010C GLK1P17709 500 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C MDH2P22133 377 aa1.89□□□□□ -2.11
UFD4YKL010C YCR006CP25350 157 aa1.89□□□□□ -2.11
UFD4YKL010C AGP1P25376 633 aa1.89□□□□□ -2.11
UFD4YKL010C BOS1P25385 244 aa1.89□□□□□ -2.11
UFD4YKL010C DAL3P32459 195 aa1.89□□□□□ -2.11
UFD4YKL010C PDC2P32896 925 aa1.89□□□□□ -2.11
UFD4YKL010C SRX1P36077 127 aa1.89□□□□□ -2.11
UFD4YKL010C ECM34P38728 170 aa1.89□□□□□ -2.11
UFD4YKL010C SUR2P38992 349 aa1.89□□□□□ -2.11
UFD4YKL010C RFC4P40339 323 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C ZIM17P42844 174 aa1.89□□□□□ -2.11
UFD4YKL010C MRPS18P42847 217 aa1.89□□□□□ -2.11
UFD4YKL010C TAD2P47058 250 aa1.89□□□□□ -2.11
UFD4YKL010C PGU1P47180 361 aa1.89□□□□□ -2.11
UFD4YKL010C PHO23P50947 330 aa1.89□□□□□ -2.11
UFD4YKL010C YIP4P53093 235 aa1.89□□□□□ -2.11
UFD4YKL010C YGL159WP53110 370 aa1.89□□□□□ -2.11
UFD4YKL010C DID2P69771 204 aa1.89□□□□□ -2.11
UFD4YKL010C NOC4Q06512 552 aaPredicted RBP1.89□□□□□ -2.11
UFD4YKL010C FEX2Q08991 375 aa1.89□□□□□ -2.11
UFD4YKL010C FRE8Q12209 686 aa1.89□□□□□ -2.11
UFD4YKL010C MEX67Q99257 599 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C GAS1P22146 559 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C RFA3P26755 122 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C SNC2P33328 115 aa1.89□□□□□ -2.11
UFD4YKL010C SRY1P36007 326 aa1.89□□□□□ -2.11
UFD4YKL010C SRP102P36057 244 aaPredicted RBP1.89□□□□□ -2.11
UFD4YKL010C AUR1P36107 401 aaPredicted RBP1.89□□□□□ -2.11
UFD4YKL010C UTH1P36135 365 aa1.89□□□□□ -2.11
UFD4YKL010C YPT31P38555 223 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C YJR141WP47172 347 aaPredicted RBP1.89□□□□□ -2.11
UFD4YKL010C BUL1P48524 976 aa1.89□□□□□ -2.11
UFD4YKL010C NIT3P49954 291 aa1.89□□□□□ -2.11
UFD4YKL010C AAH1P53909 347 aa1.89□□□□□ -2.11
UFD4YKL010C ACT1P60010 375 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C SCP1Q08873 200 aa1.89□□□□□ -2.11
UFD4YKL010C YDR262WQ12331 272 aa1.89□□□□□ -2.11
UFD4YKL010C MET3P08536 511 aa1.88□□□□□ -2.11
UFD4YKL010C SHM2P37291 469 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C MTC4P38335 694 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C FMC1P40491 155 aa1.88□□□□□ -2.11
UFD4YKL010C TIR3P40552 269 aa1.88□□□□□ -2.11
UFD4YKL010C ERJ5P43613 295 aaPredicted RBP1.88□□□□□ -2.11
UFD4YKL010C SUN4P53616 420 aa1.88□□□□□ -2.11
UFD4YKL010C THI74Q04083 370 aa1.88□□□□□ -2.11
UFD4YKL010C MRX8Q05473 314 aa1.88□□□□□ -2.11
UFD4YKL010C MRX9Q07349 420 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C RFU1Q08003 200 aa1.88□□□□□ -2.11
UFD4YKL010C MIM1Q08176 113 aa1.88□□□□□ -2.11
UFD4YKL010C CDC28P00546 298 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C HIP1P06775 603 aa1.88□□□□□ -2.11
UFD4YKL010C RIP1P08067 215 aa1.88□□□□□ -2.11
UFD4YKL010C RPB8P20436 146 aa1.88□□□□□ -2.11
UFD4YKL010C BFR1P38934 470 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
UFD4YKL010C YEA6P39953 335 aa1.88□□□□□ -2.11
UFD4YKL010C PGD1P40356 397 aa1.88□□□□□ -2.11
UFD4YKL010C RPL10P41805 221 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C PNC1P53184 216 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C RVB1Q03940 463 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C SRL2Q12020 392 aa1.88□□□□□ -2.11
UFD4YKL010C ADK1P07170 222 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C TY1A-LR4P0C2I8 440 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C TY1A-DR6P0CX70 440 aa1.88□□□□□ -2.11
UFD4YKL010C TY1A-ER1P0CX71 440 aa1.88□□□□□ -2.11
UFD4YKL010C TY1A-LR2P0CX72 440 aa1.88□□□□□ -2.11
UFD4YKL010C TY1A-PLP0CX73 440 aa1.88□□□□□ -2.11
UFD4YKL010C TY1A-JR1P0CX74 440 aa1.88□□□□□ -2.11
UFD4YKL010C TY1A-LR3P0CX75 440 aa1.88□□□□□ -2.11
UFD4YKL010C TY1A-ML2P0CX76 440 aa1.88□□□□□ -2.11
UFD4YKL010C AIM17P23180 465 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C RNA14P25298 677 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C IMG1P25626 169 aa1.88□□□□□ -2.11
UFD4YKL010C ATG15P25641 520 aa1.88□□□□□ -2.11
UFD4YKL010C PPA2P28239 310 aa1.88□□□□□ -2.11
UFD4YKL010C SRP21P32342 167 aa1.88□□□□□ -2.11
UFD4YKL010C SRB6P32570 121 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms