RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TDA3	YHR009C	TSA2	Q04120	196 aa		3.21	□□□□□ -1.89
TDA3	YHR009C	PLB3	Q08108	686 aa		3.21	□□□□□ -1.89
TDA3	YHR009C	MYO2	P19524	1574 aa	Known RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	ADH1	P00330	348 aa	Known RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	TPI1	P00942	248 aa	Known RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	CBP6	P07253	162 aa	Predicted RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	CDC33	P07260	213 aa	Known RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	POX1	P13711	748 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
TDA3	YHR009C	YMR31	P19955	123 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	YCR102C	P25608	368 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	CAT2	P32796	670 aa	Known RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	YPT52	P36018	234 aa	Known RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	DBP7	P36120	742 aa	Known RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	MAL32	P38158	584 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	VMA22	P38784	181 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	FCY21	P40039	528 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	HAM1	P47119	197 aa	Known RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	MAL12	P53341	584 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	HAL1	Q01766	294 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	YMR166C	Q03829	368 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	FAR8	Q05040	523 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	YPR098C	Q06089	161 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	YPD1	Q07688	167 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	COQ10	Q08058	207 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	RRS1	Q08746	203 aa	Known RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	RFM1	Q12192	310 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	SNU23	Q12368	194 aa	Predicted RBP	3.21	□□□□□ -1.9
TDA3	YHR009C	NCB2	Q92317	146 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	SEY1	Q99287	776 aa		3.21	□□□□□ -1.9
TDA3	YHR009C	DBF2	P22204	572 aa		3.2	□□□□□ -1.9
TDA3	YHR009C	RPB9	P27999	122 aa		3.2	□□□□□ -1.9
TDA3	YHR009C	URA8	P38627	578 aa	Predicted RBP	3.2	□□□□□ -1.9
TDA3	YHR009C	EDC2	P40023	145 aa	Predicted RBP	3.2	□□□□□ -1.9
TDA3	YHR009C	YIL054W	P40524	105 aa		3.2	□□□□□ -1.9
TDA3	YHR009C	SCW10	Q04951	389 aa		3.2	□□□□□ -1.9
TDA3	YHR009C	YKL068W-A	Q3E826	78 aa		3.2	□□□□□ -1.9
TDA3	YHR009C	TAF2	P23255	1407 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	PSK1	P31374	1356 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	STE18	P18852	110 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	COX10	P21592	462 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	PRP18	P33411	251 aa	Predicted RBP	3.19	□□□□□ -1.9
TDA3	YHR009C	CBT1	P36038	271 aa	Predicted RBP	3.19	□□□□□ -1.9
TDA3	YHR009C	YKL075C	P36083	450 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	FES1	P38260	290 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	GOS1	P38736	223 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	ASP1	P38986	381 aa	Predicted RBP	3.19	□□□□□ -1.9
TDA3	YHR009C	ERG28	P40030	148 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	AGE2	P40529	298 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	RBL2	P48606	106 aa	Known RBP	3.19	□□□□□ -1.9
TDA3	YHR009C	YKR005C	Q02203	525 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	PEX10	Q05568	337 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	DIB1	Q06819	143 aa	Predicted RBP	3.19	□□□□□ -1.9
TDA3	YHR009C	YLR031W	Q07978	186 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	YKL183C-A	Q3E765	70 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	HSL1	P34244	1518 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	GEA1	P47102	1408 aa	Predicted RBP	3.19	□□□□□ -1.9
TDA3	YHR009C	TUS1	Q06412	1307 aa		3.19	□□□□□ -1.9
TDA3	YHR009C	MDS3	P53094	1487 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	SCC2	Q04002	1493 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	NUP157	P40064	1391 aa	Known RBP	3.18	□□□□□ -1.9
TDA3	YHR009C	YBR121C-A	P0C5L4	52 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	CKA2	P19454	339 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	PHO80	P20052	293 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	OSM1	P21375	501 aa	Known RBP	3.18	□□□□□ -1.9
TDA3	YHR009C	CAF4	P36130	643 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	UTH1	P36135	365 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	HMT1	P38074	348 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	CUE1	P38428	203 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	AVT6	P40074	448 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	COX15	P40086	486 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	CIN5	P40917	295 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	UFE1	P41834	346 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	SWP1	Q02795	286 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	SPC24	Q04477	213 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	MCH1	Q07376	486 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	TIR4	Q12218	487 aa	Predicted RBP	3.18	□□□□□ -1.9
TDA3	YHR009C	CMC2	Q3E7A4	109 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	FLO11	P08640	1367 aa		3.18	□□□□□ -1.9
TDA3	YHR009C	SIN3	P22579	1536 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	HSP30	P25619	332 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	MGM101	P32787	269 aa	Known RBP	3.17	□□□□□ -1.9
TDA3	YHR009C	MRPL17	P36528	281 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	PHO89	P38361	574 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	YER137C	P40083	148 aa	Known RBP	3.17	□□□□□ -1.9
TDA3	YHR009C	YIL001W	P40560	513 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	DXO1	Q06349	442 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	LTE1	P07866	1435 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	MET5	P47169	1442 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	BPT1	P14772	1559 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	YKR104W	P0CE69	306 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	COS2	P0CX12	379 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	COS3	P0CX13	379 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	LDB16	P25587	256 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	SGE1	P33335	543 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	YAP3	P38749	330 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	YNL194C	P40169	301 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	SYS1	P41544	203 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	COS4	P43542	379 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	PDR10	P51533	1564 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms