RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeast

Gene VAM7, Length 951 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM7	YGL212W	MTR3	P48240	250 aa	Predicted RBP	4.93	□□□□□ -1.62
VAM7	YGL212W	ALG13	P53178	202 aa		4.93	□□□□□ -1.62
VAM7	YGL212W	COX18	P53239	316 aa		4.93	□□□□□ -1.62
VAM7	YGL212W	YGR079W	P53249	370 aa		4.93	□□□□□ -1.62
VAM7	YGL212W	HST3	P53687	447 aa		4.93	□□□□□ -1.62
VAM7	YGL212W	SLG1	P54867	378 aa		4.93	□□□□□ -1.62
VAM7	YGL212W	GPI17	Q04080	534 aa		4.93	□□□□□ -1.62
VAM7	YGL212W	YML096W	Q04489	525 aa		4.93	□□□□□ -1.62
VAM7	YGL212W	FSF1	Q12029	327 aa	Known RBP	4.93	□□□□□ -1.62
VAM7	YGL212W	MRH1	Q12117	320 aa	Predicted RBP	4.93	□□□□□ -1.62
VAM7	YGL212W	YLL056C	Q12177	298 aa		4.93	□□□□□ -1.62
VAM7	YGL212W	MIR1	P23641	311 aa	Known RBP	4.92	□□□□□ -1.62
VAM7	YGL212W	SCO1	P23833	295 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	PCL1	P24867	279 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	ACB1	P31787	87 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	ARO7	P32178	256 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	NTF2	P33331	125 aa	Known RBP	4.92	□□□□□ -1.62
VAM7	YGL212W	TIR2	P33890	251 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	YPT53	P36019	220 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	AHP1	P38013	176 aa	Known RBP	4.92	□□□□□ -1.62
VAM7	YGL212W	YBR062C	P38239	180 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	POP1	P41812	875 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	PMT4	P46971	762 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	SSY5	P47002	699 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	MNN10	P50108	393 aa	Known RBP	4.92	□□□□□ -1.62
VAM7	YGL212W	ARO8	P53090	500 aa	Known RBP	4.92	□□□□□ -1.62
VAM7	YGL212W	YLR152C	P54072	576 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	YPL068C	Q02749	293 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	YMR178W	Q03219	274 aa	Known RBP	4.92	□□□□□ -1.62
VAM7	YGL212W	TMA23	Q03525	211 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	TDA1	Q03533	586 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	FMN1	Q03778	218 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	NUP53	Q03790	475 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	VBA1	Q04301	562 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	COQ9	Q05779	260 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	COA4	Q05809	96 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	CTR3	Q06686	241 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	HEM25	Q07534	307 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	OSW1	Q08692	278 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	UIP4	Q08926	304 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	RNH203	Q12338	110 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	GEP5	Q12393	293 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	SAS5	Q99314	248 aa		4.92	□□□□□ -1.62
VAM7	YGL212W	TPK3	P05986	398 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	CDC4	P07834	779 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	MXR2	P25566	168 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	TAH1	P25638	111 aa	Predicted RBP	4.91	□□□□□ -1.62
VAM7	YGL212W	RFA2	P26754	273 aa	Known RBP	4.91	□□□□□ -1.62
VAM7	YGL212W	DCG1	P32460	244 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	SPS18	P32572	300 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	MUD1	P32605	298 aa	Known RBP	4.91	□□□□□ -1.62
VAM7	YGL212W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
VAM7	YGL212W	PAN3	P36102	679 aa	Predicted RBP	4.91	□□□□□ -1.62
VAM7	YGL212W	SOL2	P37262	315 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	ERV46	P39727	415 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	GLE2	P40066	365 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	GTT1	P40582	234 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	CHA4	P43634	648 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	TIS11	P47977	285 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	NMA2	P53204	395 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	SOK2	P53438	785 aa	Predicted RBP	4.91	□□□□□ -1.62
VAM7	YGL212W	KTR5	P53966	522 aa	Predicted RBP	4.91	□□□□□ -1.62
VAM7	YGL212W	NAM8	Q00539	523 aa	Known RBP	4.91	□□□□□ -1.62
VAM7	YGL212W	DOT1	Q04089	582 aa	Known RBP	4.91	□□□□□ -1.62
VAM7	YGL212W	CAC2	Q04199	468 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	HOF1	Q05080	669 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	PBP4	Q07362	185 aa	Known RBP	4.91	□□□□□ -1.62
VAM7	YGL212W	YLR030W	Q07967	263 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	MED7	Q08278	222 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	ICT1	Q12385	394 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	BI3	Q9ZZW7	517 aa		4.91	□□□□□ -1.62
VAM7	YGL212W	BRR2	P32639	2163 aa	Known RBP	4.9	□□□□□ -1.62
VAM7	YGL212W	ILV1	P00927	576 aa	Known RBP	4.9	□□□□□ -1.63
VAM7	YGL212W	RPL20A	P0CX23	172 aa	Known RBP	4.9	□□□□□ -1.63
VAM7	YGL212W	RPL20B	P0CX24	172 aa	Predicted RBP	4.9	□□□□□ -1.63
VAM7	YGL212W	RPL12A	P0CX53	165 aa	Known RBP	4.9	□□□□□ -1.63
VAM7	YGL212W	RPL12B	P0CX54	165 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	NUP1	P20676	1076 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	GAR1	P28007	205 aa	Known RBP	4.9	□□□□□ -1.63
VAM7	YGL212W	YKL187C	P34231	750 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	LST4	P34239	828 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	THI80	P35202	319 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	SOR1	P35497	357 aa	Known RBP	4.9	□□□□□ -1.63
VAM7	YGL212W	KAE1	P36132	386 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	SKG1	P36169	355 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	MET30	P39014	640 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	SMB1	P40018	196 aa	Known RBP	4.9	□□□□□ -1.63
VAM7	YGL212W	AYR1	P40471	297 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	PTR3	P43606	678 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	AIM23	P47015	356 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	OST3	P48439	350 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	ASN1	P49089	572 aa	Known RBP	4.9	□□□□□ -1.63
VAM7	YGL212W	YNR062C	P53748	327 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	ERG5	P54781	538 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	TSA2	Q04120	196 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	ECI1	Q05871	280 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	SEI1	Q06058	285 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	YTH1	Q06102	208 aa	Predicted RBP	4.9	□□□□□ -1.63
VAM7	YGL212W	SOR2	Q07786	357 aa		4.9	□□□□□ -1.63
VAM7	YGL212W	RKI1	Q12189	258 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms