RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W CIK1Q01649 594 aa4.3□□□□□ -1.72
RPN12YFR052W YDR391CQ04170 232 aa4.3□□□□□ -1.72
RPN12YFR052W YDR114CQ04597 100 aa4.3□□□□□ -1.72
RPN12YFR052W GAL83Q04739 417 aa4.3□□□□□ -1.72
RPN12YFR052W HEM25Q07534 307 aa4.3□□□□□ -1.72
RPN12YFR052W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
RPN12YFR052W VCX1Q99385 411 aa4.3□□□□□ -1.72
RPN12YFR052W RPL39P04650 51 aa4.29□□□□□ -1.72
RPN12YFR052W ADK1P07170 222 aaKnown RBP4.29□□□□□ -1.72
RPN12YFR052W RPS23AP0CX29 145 aaKnown RBP4.29□□□□□ -1.72
RPN12YFR052W RPS23BP0CX30 145 aa4.29□□□□□ -1.72
RPN12YFR052W MSI1P13712 422 aa4.29□□□□□ -1.72
RPN12YFR052W DEG1P31115 442 aaKnown RBP4.29□□□□□ -1.72
RPN12YFR052W ZRT3P34240 503 aa4.29□□□□□ -1.72
RPN12YFR052W EGT2P42835 1041 aa4.29□□□□□ -1.72
RPN12YFR052W EFM3P47163 339 aa4.29□□□□□ -1.72
RPN12YFR052W CCC1P47818 322 aa4.29□□□□□ -1.72
RPN12YFR052W YIP4P53093 235 aa4.29□□□□□ -1.72
RPN12YFR052W PEF1P53238 335 aa4.29□□□□□ -1.72
RPN12YFR052W YLR152CP54072 576 aa4.29□□□□□ -1.72
RPN12YFR052W SNA4Q07549 140 aa4.29□□□□□ -1.72
RPN12YFR052W YLR108CQ12259 485 aa4.29□□□□□ -1.72
RPN12YFR052W GEP5Q12393 293 aa4.29□□□□□ -1.72
RPN12YFR052W ISA2Q12425 185 aa4.29□□□□□ -1.72
RPN12YFR052W YPR1Q12458 312 aa4.29□□□□□ -1.72
RPN12YFR052W YLR099W-AQ3E798 87 aa4.29□□□□□ -1.72
RPN12YFR052W YEL009C-AA0A023PZF2 135 aa4.28□□□□□ -1.72
RPN12YFR052W TDH3P00359 332 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
RPN12YFR052W RPL6BP05739 176 aaKnown RBP4.28□□□□□ -1.72
RPN12YFR052W MNS1P32906 549 aa4.28□□□□□ -1.72
RPN12YFR052W VPS17P32913 551 aa4.28□□□□□ -1.72
RPN12YFR052W MTH1P35198 433 aa4.28□□□□□ -1.72
RPN12YFR052W PAU24P38155 120 aa4.28□□□□□ -1.72
RPN12YFR052W TCM62P38228 572 aaKnown RBP4.28□□□□□ -1.72
RPN12YFR052W CTR2P38865 189 aa4.28□□□□□ -1.72
RPN12YFR052W DLS1P40366 167 aa4.28□□□□□ -1.72
RPN12YFR052W GDS1P41913 522 aa4.28□□□□□ -1.72
RPN12YFR052W GLR1P41921 483 aaKnown RBP4.28□□□□□ -1.72
RPN12YFR052W RAI1P53063 387 aaKnown RBP4.28□□□□□ -1.72
RPN12YFR052W YGL159WP53110 370 aa4.28□□□□□ -1.72
RPN12YFR052W YNR048WP53740 393 aa4.28□□□□□ -1.72
RPN12YFR052W GPI17Q04080 534 aa4.28□□□□□ -1.72
RPN12YFR052W NEJ1Q06148 342 aa4.28□□□□□ -1.72
RPN12YFR052W YPR196WQ06595 470 aa4.28□□□□□ -1.72
RPN12YFR052W TSR2Q06672 205 aaKnown RBP4.28□□□□□ -1.72
RPN12YFR052W TIR4Q12218 487 aaPredicted RBP4.28□□□□□ -1.72
RPN12YFR052W YOR097CQ12274 175 aaPredicted RBP4.28□□□□□ -1.72
RPN12YFR052W FRE6Q12473 712 aa4.28□□□□□ -1.72
RPN12YFR052W MET3P08536 511 aa4.27□□□□□ -1.73
RPN12YFR052W MRP1P10662 321 aaKnown RBP4.27□□□□□ -1.73
RPN12YFR052W NAM2P11325 894 aa4.27□□□□□ -1.73
RPN12YFR052W VMA6P32366 345 aaKnown RBP4.27□□□□□ -1.73
RPN12YFR052W MTC7P32633 139 aa4.27□□□□□ -1.73
RPN12YFR052W MTC2P34246 357 aa4.27□□□□□ -1.73
RPN12YFR052W SDS24P38314 527 aa4.27□□□□□ -1.73
RPN12YFR052W SSH1P38353 490 aaKnown RBP4.27□□□□□ -1.73
RPN12YFR052W GOS1P38736 223 aa4.27□□□□□ -1.73
RPN12YFR052W ARO9P38840 513 aaPredicted RBP4.27□□□□□ -1.73
RPN12YFR052W NCA3P46955 337 aa4.27□□□□□ -1.73
RPN12YFR052W MTL1P53214 551 aa4.27□□□□□ -1.73
RPN12YFR052W NRK1P53915 240 aa4.27□□□□□ -1.73
RPN12YFR052W RNH201P53942 307 aa4.27□□□□□ -1.73
RPN12YFR052W HHT1P61830 136 aa4.27□□□□□ -1.73
RPN12YFR052W TMA20P89886 181 aaPredicted RBP4.27□□□□□ -1.73
RPN12YFR052W DLT1Q04216 342 aa4.27□□□□□ -1.73
RPN12YFR052W ENV7Q12003 364 aa4.27□□□□□ -1.73
RPN12YFR052W FRE8Q12209 686 aa4.27□□□□□ -1.73
RPN12YFR052W RTR2Q12378 196 aa4.27□□□□□ -1.73
RPN12YFR052W REP2P03872 296 aa4.26□□□□□ -1.73
RPN12YFR052W SIR2P06700 562 aa4.26□□□□□ -1.73
RPN12YFR052W COX9P07255 59 aa4.26□□□□□ -1.73
RPN12YFR052W RPL30P14120 105 aaKnown RBP4.26□□□□□ -1.73
RPN12YFR052W SAG1P20840 650 aa4.26□□□□□ -1.73
RPN12YFR052W PRE7P23724 241 aaKnown RBP4.26□□□□□ -1.73
RPN12YFR052W RPL24BP24000 155 aaKnown RBP4.26□□□□□ -1.73
RPN12YFR052W AFG1P32317 509 aa4.26□□□□□ -1.73
RPN12YFR052W ERG24P32462 438 aaKnown RBP4.26□□□□□ -1.73
RPN12YFR052W DOA4P32571 926 aa4.26□□□□□ -1.73
RPN12YFR052W REC114P32841 428 aa4.26□□□□□ -1.73
RPN12YFR052W FAT1P38225 669 aa4.26□□□□□ -1.73
RPN12YFR052W ARC40P38328 384 aaKnown RBP4.26□□□□□ -1.73
RPN12YFR052W YND1P40009 630 aa4.26□□□□□ -1.73
RPN12YFR052W YER079WP40052 210 aaKnown RBP4.26□□□□□ -1.73
RPN12YFR052W YIR020CP40575 100 aa4.26□□□□□ -1.73
RPN12YFR052W ERJ5P43613 295 aaPredicted RBP4.26□□□□□ -1.73
RPN12YFR052W BNA2P47125 453 aa4.26□□□□□ -1.73
RPN12YFR052W AVT4P50944 713 aa4.26□□□□□ -1.73
RPN12YFR052W PMT5P52867 743 aa4.26□□□□□ -1.73
RPN12YFR052W SBH2P52871 88 aa4.26□□□□□ -1.73
RPN12YFR052W YGL204CP53089 101 aa4.26□□□□□ -1.73
RPN12YFR052W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
RPN12YFR052W YDC1Q02896 317 aa4.26□□□□□ -1.73
RPN12YFR052W YPR098CQ06089 161 aa4.26□□□□□ -1.73
RPN12YFR052W TPO3Q06451 622 aa4.26□□□□□ -1.73
RPN12YFR052W ORT1Q12375 292 aa4.26□□□□□ -1.73
RPN12YFR052W YCL048W-AQ2V2Q2 79 aa4.26□□□□□ -1.73
RPN12YFR052W FSH3Q99369 266 aa4.26□□□□□ -1.73
RPN12YFR052W YML003WP0CF16 290 aa4.25□□□□□ -1.73
RPN12YFR052W RPS18AP0CX55 146 aaKnown RBP4.25□□□□□ -1.73
RPN12YFR052W RPS18BP0CX56 146 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms