RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C KRE28Q04431 385 aa1.01□□□□□ -2.25
SWI4YER111C MRX8Q05473 314 aa1.01□□□□□ -2.25
SWI4YER111C ATG38Q05789 226 aaKnown RBP1.01□□□□□ -2.25
SWI4YER111C SSQ1Q05931 657 aaPredicted RBP1.01□□□□□ -2.25
SWI4YER111C PLB3Q08108 686 aa1.01□□□□□ -2.25
SWI4YER111C YAL067W-AQ8TGK6 75 aa1.01□□□□□ -2.25
SWI4YER111C YLR419WQ06698 1435 aaKnown RBP1.01□□□□□ -2.25
SWI4YER111C YAL064W-BO13512 126 aa1.01□□□□□ -2.25
SWI4YER111C RPP0P05317 312 aaKnown RBP1.01□□□□□ -2.25
SWI4YER111C YBR121C-AP0C5L4 52 aa1.01□□□□□ -2.25
SWI4YER111C MATALPHA2P0CY08 210 aa1.01□□□□□ -2.25
SWI4YER111C HMLALPHA2P0CY09 210 aa1.01□□□□□ -2.25
SWI4YER111C FUS3P16892 353 aaKnown RBP1.01□□□□□ -2.25
SWI4YER111C YMR31P19955 123 aa1.01□□□□□ -2.25
SWI4YER111C OSM1P21375 501 aaKnown RBP1.01□□□□□ -2.25
SWI4YER111C YCR025CP25352 136 aa1.01□□□□□ -2.25
SWI4YER111C PBN1P25580 416 aa1.01□□□□□ -2.25
SWI4YER111C FZO1P38297 855 aa1.01□□□□□ -2.25
SWI4YER111C YHR127WP38833 243 aaKnown RBP1.01□□□□□ -2.25
SWI4YER111C YNL194CP40169 301 aa1.01□□□□□ -2.25
SWI4YER111C RAD17P48581 401 aa1.01□□□□□ -2.25
SWI4YER111C YGL039WP53183 348 aaKnown RBP1.01□□□□□ -2.25
SWI4YER111C SLX9P53251 210 aaPredicted RBP1.01□□□□□ -2.25
SWI4YER111C SNZ2P53824 298 aa1.01□□□□□ -2.25
SWI4YER111C TRM44Q02648 567 aaKnown RBP1.01□□□□□ -2.25
SWI4YER111C DCR2Q05924 578 aa1.01□□□□□ -2.25
SWI4YER111C ATG17Q06410 417 aa1.01□□□□□ -2.25
SWI4YER111C HEM25Q07534 307 aa1.01□□□□□ -2.25
SWI4YER111C SME1Q12330 94 aaPredicted RBP1.01□□□□□ -2.25
SWI4YER111C SEY1Q99287 776 aa1.01□□□□□ -2.25
SWI4YER111C SIR4P11978 1358 aa1.01□□□□□ -2.25
SWI4YER111C CDC33P07260 213 aaKnown RBP1□□□□□ -2.25
SWI4YER111C RPL4AP10664 362 aaKnown RBP1□□□□□ -2.25
SWI4YER111C SMB1P40018 196 aaKnown RBP1□□□□□ -2.25
SWI4YER111C IBA57P47158 497 aa1□□□□□ -2.25
SWI4YER111C RPL4BP49626 362 aaKnown RBP1□□□□□ -2.25
SWI4YER111C HSH155P49955 971 aaKnown RBP1□□□□□ -2.25
SWI4YER111C SDT1P53078 280 aa1□□□□□ -2.25
SWI4YER111C FMP41P53889 259 aaKnown RBP1□□□□□ -2.25
SWI4YER111C VHS1Q03785 461 aa1□□□□□ -2.25
SWI4YER111C SCW10Q04951 389 aa1□□□□□ -2.25
SWI4YER111C MHR1Q06630 226 aa1□□□□□ -2.25
SWI4YER111C SLD7Q08457 257 aa1□□□□□ -2.25
SWI4YER111C YCT1Q12235 531 aa1□□□□□ -2.25
SWI4YER111C YLR126CQ12288 251 aa1□□□□□ -2.25
SWI4YER111C CDC10P25342 322 aaKnown RBP1□□□□□ -2.25
SWI4YER111C PEX3P28795 441 aa1□□□□□ -2.25
SWI4YER111C IDH1P28834 360 aaKnown RBP RIP-Chip data1□□□□□ -2.25not detected
SWI4YER111C VMA6P32366 345 aaKnown RBP1□□□□□ -2.25
SWI4YER111C PRP18P33411 251 aaPredicted RBP1□□□□□ -2.25
SWI4YER111C RIB1P38066 345 aa1□□□□□ -2.25
SWI4YER111C POP8P38208 133 aa1□□□□□ -2.25
SWI4YER111C SHE3P38272 425 aaKnown RBP1□□□□□ -2.25
SWI4YER111C MBA1P38300 278 aa1□□□□□ -2.25
SWI4YER111C SSH1P38353 490 aaKnown RBP1□□□□□ -2.25
SWI4YER111C YHL049CP38722 271 aa1□□□□□ -2.25
SWI4YER111C AVT6P40074 448 aa1□□□□□ -2.25
SWI4YER111C SER33P40510 469 aa1□□□□□ -2.25
SWI4YER111C SNZ3P43545 298 aa1□□□□□ -2.25
SWI4YER111C SWS2P53937 143 aa1□□□□□ -2.25
SWI4YER111C YPR172WQ06608 200 aa1□□□□□ -2.25
SWI4YER111C YDL211CQ12121 372 aa1□□□□□ -2.25
SWI4YER111C AUS1Q08409 1394 aa1□□□□□ -2.25
SWI4YER111C RPS19AP07280 144 aaKnown RBP1□□□□□ -2.25
SWI4YER111C RPS19BP07281 144 aaPredicted RBP1□□□□□ -2.25
SWI4YER111C PPH21P23594 369 aa1□□□□□ -2.25
SWI4YER111C SSO1P32867 290 aa1□□□□□ -2.25
SWI4YER111C MRX3P38172 270 aa1□□□□□ -2.25
SWI4YER111C YBL081WP38180 368 aaKnown RBP1□□□□□ -2.25
SWI4YER111C MED8P38304 223 aa1□□□□□ -2.25
SWI4YER111C ASP1P38986 381 aaPredicted RBP1□□□□□ -2.25
SWI4YER111C FRT2P39734 528 aa1□□□□□ -2.25
SWI4YER111C YMR144WP40214 342 aaKnown RBP1□□□□□ -2.25
SWI4YER111C YFL012WP43580 148 aa1□□□□□ -2.25
SWI4YER111C GLG2P47011 380 aa1□□□□□ -2.25
SWI4YER111C NIF3P53081 288 aa1□□□□□ -2.25
SWI4YER111C NSA1P53136 463 aaPredicted RBP1□□□□□ -2.25
SWI4YER111C GOT1Q03554 138 aa1□□□□□ -2.25
SWI4YER111C YMR226CQ05016 267 aaKnown RBP1□□□□□ -2.25
SWI4YER111C YLR283WQ05867 314 aa1□□□□□ -2.25
SWI4YER111C CDD1Q06549 142 aa1□□□□□ -2.25
SWI4YER111C YBL008W-AQ3E821 79 aa1□□□□□ -2.25
SWI4YER111C YEL009C-AA0A023PZF2 135 aa0.99□□□□□ -2.25
SWI4YER111C RPL27AP0C2H6 136 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C RPL27BP0C2H7 136 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C YKR104WP0CE69 306 aa0.99□□□□□ -2.25
SWI4YER111C RAD9P14737 1309 aa0.99□□□□□ -2.25
SWI4YER111C ISY1P21374 235 aaPredicted RBP0.99□□□□□ -2.25
SWI4YER111C ATG15P25641 520 aa0.99□□□□□ -2.25
SWI4YER111C ERG2P32352 222 aa0.99□□□□□ -2.25
SWI4YER111C TIP20P33891 701 aa0.99□□□□□ -2.25
SWI4YER111C VPS21P36017 210 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C MIC19P43594 170 aa0.99□□□□□ -2.25
SWI4YER111C HOC1P47124 396 aa0.99□□□□□ -2.25
SWI4YER111C LIF1P53150 421 aa0.99□□□□□ -2.25
SWI4YER111C CTF19Q02732 369 aa0.99□□□□□ -2.25
SWI4YER111C YLR179CQ06252 201 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C YDR018CQ12185 396 aa0.99□□□□□ -2.25
SWI4YER111C RFM1Q12192 310 aa0.99□□□□□ -2.25
SWI4YER111C TIR4Q12218 487 aaPredicted RBP0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms