RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W FOL3Q12676 427 aaPredicted RBP2.32□□□□□ -2.04
PRE1YER012W Q0144Q9ZZW2 109 aa2.32□□□□□ -2.04
PRE1YER012W STE7P06784 515 aa2.31□□□□□ -2.04
PRE1YER012W RPB5P20434 215 aa2.31□□□□□ -2.04
PRE1YER012W SAG1P20840 650 aa2.31□□□□□ -2.04
PRE1YER012W CCA1P21269 546 aa2.31□□□□□ -2.04
PRE1YER012W MDH2P22133 377 aa2.31□□□□□ -2.04
PRE1YER012W YEF1P32622 495 aa2.31□□□□□ -2.04
PRE1YER012W YCR087C-AP37263 153 aa2.31□□□□□ -2.04
PRE1YER012W GPX2P38143 162 aa2.31□□□□□ -2.04
PRE1YER012W GDT1P38301 280 aaPredicted RBP2.31□□□□□ -2.04
PRE1YER012W FRT2P39734 528 aa2.31□□□□□ -2.04
PRE1YER012W AYR1P40471 297 aa2.31□□□□□ -2.04
PRE1YER012W HPM1P40481 377 aa2.31□□□□□ -2.04
PRE1YER012W YIL001WP40560 513 aa2.31□□□□□ -2.04
PRE1YER012W EFM3P47163 339 aa2.31□□□□□ -2.04
PRE1YER012W GTO1P48239 356 aa2.31□□□□□ -2.04
PRE1YER012W YGL262WP53054 175 aa2.31□□□□□ -2.04
PRE1YER012W MST27P53176 234 aa2.31□□□□□ -2.04
PRE1YER012W NCE101Q02820 53 aa2.31□□□□□ -2.04
PRE1YER012W PRP3Q03338 469 aaPredicted RBP2.31□□□□□ -2.04
PRE1YER012W MFG1Q07684 458 aa2.31□□□□□ -2.04
PRE1YER012W YLR036CQ07986 203 aa2.31□□□□□ -2.04
PRE1YER012W YOP1Q12402 180 aa2.31□□□□□ -2.04
PRE1YER012W PSF1Q12488 208 aa2.31□□□□□ -2.04
PRE1YER012W URA2P07259 2214 aaKnown RBP2.3□□□□□ -2.04
PRE1YER012W RAS2P01120 322 aaKnown RBP2.3□□□□□ -2.04
PRE1YER012W CBP6P07253 162 aaPredicted RBP2.3□□□□□ -2.04
PRE1YER012W TFS1P14306 219 aa2.3□□□□□ -2.04
PRE1YER012W TAL1P15019 335 aaKnown RBP2.3□□□□□ -2.04
PRE1YER012W ERD1P16151 362 aa2.3□□□□□ -2.04
PRE1YER012W YKL187CP34231 750 aa2.3□□□□□ -2.04
PRE1YER012W MRPL17P36528 281 aa2.3□□□□□ -2.04
PRE1YER012W YMR262WP38430 313 aa2.3□□□□□ -2.04
PRE1YER012W YGP1P38616 354 aaKnown RBP2.3□□□□□ -2.04
PRE1YER012W GEP4P38812 185 aa2.3□□□□□ -2.04
PRE1YER012W PFS2P42841 465 aaKnown RBP2.3□□□□□ -2.04
PRE1YER012W RPA34P47006 233 aaPredicted RBP2.3□□□□□ -2.04
PRE1YER012W KEL2P50090 882 aa2.3□□□□□ -2.04
PRE1YER012W SHE4P51534 789 aa2.3□□□□□ -2.04
PRE1YER012W TAF6P53040 516 aa2.3□□□□□ -2.04
PRE1YER012W LSG1P53145 640 aaKnown RBP2.3□□□□□ -2.04
PRE1YER012W RCF2P53721 224 aa2.3□□□□□ -2.04
PRE1YER012W CUS2P53830 285 aaPredicted RBP2.3□□□□□ -2.04
PRE1YER012W TDA1Q03533 586 aa2.3□□□□□ -2.04
PRE1YER012W SNX41Q04053 625 aa2.3□□□□□ -2.04
PRE1YER012W ARR1Q06596 294 aa2.3□□□□□ -2.04
PRE1YER012W REX3Q12090 404 aa2.3□□□□□ -2.04
PRE1YER012W AIM45Q12480 344 aaKnown RBP2.3□□□□□ -2.04
PRE1YER012W YCR024C-BQ3E7Z8 88 aa2.3□□□□□ -2.04
PRE1YER012W Q0297Q9ZZV8 51 aa2.3□□□□□ -2.04
PRE1YER012W YFR010W-AP0C5N0 62 aa2.29□□□□□ -2.04
PRE1YER012W RPS16AP0CX51 143 aaKnown RBP2.29□□□□□ -2.04
PRE1YER012W RPS16BP0CX52 143 aaKnown RBP2.29□□□□□ -2.04
PRE1YER012W SCO1P23833 295 aa2.29□□□□□ -2.04
PRE1YER012W RAD51P25454 400 aa2.29□□□□□ -2.04
PRE1YER012W MSK1P32048 576 aa2.29□□□□□ -2.04
PRE1YER012W TIR2P33890 251 aa2.29□□□□□ -2.04
PRE1YER012W VPS21P36017 210 aaKnown RBP2.29□□□□□ -2.04
PRE1YER012W COS9P36034 407 aa2.29□□□□□ -2.04
PRE1YER012W YHL037CP38733 133 aa2.29□□□□□ -2.04
PRE1YER012W YHK8P38776 514 aa2.29□□□□□ -2.04
PRE1YER012W NSG1P38837 291 aa2.29□□□□□ -2.04
PRE1YER012W MTW1P39731 289 aa2.29□□□□□ -2.04
PRE1YER012W RGI1P40043 161 aaPredicted RBP2.29□□□□□ -2.04
PRE1YER012W SNL1P40548 159 aa2.29□□□□□ -2.04
PRE1YER012W HAC1P41546 238 aa2.29□□□□□ -2.04
PRE1YER012W PAC10P48363 199 aa2.29□□□□□ -2.04
PRE1YER012W YLR460CP54007 376 aa2.29□□□□□ -2.04
PRE1YER012W SWP1Q02795 286 aa2.29□□□□□ -2.04
PRE1YER012W SDC1Q03323 175 aa2.29□□□□□ -2.04
PRE1YER012W NAT4Q04751 285 aa2.29□□□□□ -2.04
PRE1YER012W YLR413WQ06689 675 aa2.29□□□□□ -2.04
PRE1YER012W MDM36Q06820 579 aa2.29□□□□□ -2.04
PRE1YER012W GAT3Q07928 141 aa2.29□□□□□ -2.04
PRE1YER012W STF1P01098 86 aa2.28□□□□□ -2.04
PRE1YER012W KSS1P14681 368 aa2.28□□□□□ -2.04
PRE1YER012W MER1P16523 270 aa2.28□□□□□ -2.04
PRE1YER012W TPO5P36029 618 aa2.28□□□□□ -2.04
PRE1YER012W VPS51P36116 164 aa2.28□□□□□ -2.04
PRE1YER012W GPI18P38211 433 aa2.28□□□□□ -2.04
PRE1YER012W ARN2P38724 620 aa2.28□□□□□ -2.04
PRE1YER012W AIM24P47127 394 aa2.28□□□□□ -2.04
PRE1YER012W USE1P53146 245 aa2.28□□□□□ -2.04
PRE1YER012W COS6P53344 381 aa2.28□□□□□ -2.04
PRE1YER012W ABZ2Q03266 374 aa2.28□□□□□ -2.04
PRE1YER012W SMP3Q04174 516 aa2.28□□□□□ -2.04
PRE1YER012W GMC2Q06201 188 aa2.28□□□□□ -2.04
PRE1YER012W ARV1Q06541 321 aa2.28□□□□□ -2.04
PRE1YER012W YPR172WQ06608 200 aa2.28□□□□□ -2.04
PRE1YER012W BTS1Q12051 335 aa2.28□□□□□ -2.04
PRE1YER012W GET4Q12125 312 aa2.28□□□□□ -2.04
PRE1YER012W YOR097CQ12274 175 aaPredicted RBP2.28□□□□□ -2.04
PRE1YER012W RRP36Q12481 300 aaPredicted RBP2.28□□□□□ -2.04
PRE1YER012W YOR032W-AQ8TGS1 66 aa2.28□□□□□ -2.04
PRE1YER012W FSH3Q99369 266 aa2.28□□□□□ -2.04
PRE1YER012W ATP6P00854 259 aa2.27□□□□□ -2.05
PRE1YER012W HEM4P06174 275 aa2.27□□□□□ -2.05
PRE1YER012W YHR214C-DP0CX93 97 aa2.27□□□□□ -2.05
PRE1YER012W ZWF1P11412 505 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 339.3 ms