RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C NOP13P53883 403 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
TCA17YEL048C VMA6P32366 345 aaKnown RBP2.44□□□□□ -2.02
TCA17YEL048C VPS21P36017 210 aaKnown RBP2.44□□□□□ -2.02
TCA17YEL048C YHL049CP38722 271 aa2.44□□□□□ -2.02
TCA17YEL048C TEM1P38987 245 aa2.44□□□□□ -2.02
TCA17YEL048C MRH4P53166 561 aa2.44□□□□□ -2.02
TCA17YEL048C CGR1P53188 120 aa2.44□□□□□ -2.02
TCA17YEL048C SSU72P53538 206 aaPredicted RBP2.44□□□□□ -2.02
TCA17YEL048C YPR147CQ06522 304 aaKnown RBP2.44□□□□□ -2.02
TCA17YEL048C COQ10Q08058 207 aa2.44□□□□□ -2.02
TCA17YEL048C ATG5Q12380 294 aa2.44□□□□□ -2.02
TCA17YEL048C ISD11Q6Q560 94 aa2.44□□□□□ -2.02
TCA17YEL048C CFT1Q06632 1357 aaKnown RBP2.44□□□□□ -2.02
TCA17YEL048C YKR104WP0CE69 306 aa2.43□□□□□ -2.02
TCA17YEL048C MATALPHA1P0CY06 175 aa2.43□□□□□ -2.02
TCA17YEL048C HMLALPHA1P0CY07 175 aa2.43□□□□□ -2.02
TCA17YEL048C NHP6BP11633 99 aaKnown RBP2.43□□□□□ -2.02
TCA17YEL048C SSO1P32867 290 aa2.43□□□□□ -2.02
TCA17YEL048C SGE1P33335 543 aa2.43□□□□□ -2.02
TCA17YEL048C YKT6P36015 200 aaKnown RBP2.43□□□□□ -2.02
TCA17YEL048C YKL075CP36083 450 aa2.43□□□□□ -2.02
TCA17YEL048C DRE2P36152 348 aa2.43□□□□□ -2.02
TCA17YEL048C MRPL39P36533 70 aa2.43□□□□□ -2.02
TCA17YEL048C SPL2P38839 148 aa2.43□□□□□ -2.02
TCA17YEL048C SUR2P38992 349 aa2.43□□□□□ -2.02
TCA17YEL048C YHB1P39676 399 aaKnown RBP2.43□□□□□ -2.02
TCA17YEL048C JHD2P47156 728 aaPredicted RBP2.43□□□□□ -2.02
TCA17YEL048C YJR141WP47172 347 aaPredicted RBP2.43□□□□□ -2.02
TCA17YEL048C DSK2P48510 373 aa2.43□□□□□ -2.02
TCA17YEL048C GRX3Q03835 250 aa2.43□□□□□ -2.02
TCA17YEL048C SPG4Q04438 115 aa2.43□□□□□ -2.02
TCA17YEL048C YDR124WQ04608 324 aa2.43□□□□□ -2.02
TCA17YEL048C SYC1Q08553 188 aaPredicted RBP2.43□□□□□ -2.02
TCA17YEL048C COS2P0CX12 379 aa2.42□□□□□ -2.02
TCA17YEL048C COS3P0CX13 379 aa2.42□□□□□ -2.02
TCA17YEL048C CLB6P32943 380 aa2.42□□□□□ -2.02
TCA17YEL048C GOS1P38736 223 aa2.42□□□□□ -2.02
TCA17YEL048C PIR5P46999 287 aa2.42□□□□□ -2.02
TCA17YEL048C RHO3Q00245 231 aaKnown RBP2.42□□□□□ -2.02
TCA17YEL048C PLB3Q08108 686 aa2.42□□□□□ -2.02
TCA17YEL048C RRP40Q08285 240 aaKnown RBP2.42□□□□□ -2.02
TCA17YEL048C NUP157P40064 1391 aaKnown RBP2.41□□□□□ -2.02
TCA17YEL048C TCP1P12612 559 aaKnown RBP2.41□□□□□ -2.02
TCA17YEL048C COQ1P18900 473 aa2.41□□□□□ -2.02
TCA17YEL048C PBN1P25580 416 aa2.41□□□□□ -2.02
TCA17YEL048C YCR102CP25608 368 aa2.41□□□□□ -2.02
TCA17YEL048C DOA4P32571 926 aa2.41□□□□□ -2.02
TCA17YEL048C SFC1P33303 322 aa2.41□□□□□ -2.02
TCA17YEL048C SSH1P38353 490 aaKnown RBP2.41□□□□□ -2.02
TCA17YEL048C ARN2P38724 620 aa2.41□□□□□ -2.02
TCA17YEL048C YHR127WP38833 243 aaKnown RBP2.41□□□□□ -2.02
TCA17YEL048C OST3P48439 350 aa2.41□□□□□ -2.02
TCA17YEL048C NIF3P53081 288 aa2.41□□□□□ -2.02
TCA17YEL048C NSA1P53136 463 aaPredicted RBP2.41□□□□□ -2.02
TCA17YEL048C GOT1Q03554 138 aa2.41□□□□□ -2.02
TCA17YEL048C YMR166CQ03829 368 aa2.41□□□□□ -2.02
TCA17YEL048C BNA7Q04066 261 aa2.41□□□□□ -2.02
TCA17YEL048C RDS3Q06835 107 aaPredicted RBP2.41□□□□□ -2.02
TCA17YEL048C ADF1Q2V2Q1 113 aa2.41□□□□□ -2.02
TCA17YEL048C SEY1Q99287 776 aa2.41□□□□□ -2.02
TCA17YEL048C THP2O13539 261 aaKnown RBP2.4□□□□□ -2.03
TCA17YEL048C RHO1P06780 209 aaKnown RBP2.4□□□□□ -2.03
TCA17YEL048C SPT3P06844 337 aa2.4□□□□□ -2.03
TCA17YEL048C YBR096WP38256 230 aa2.4□□□□□ -2.03
TCA17YEL048C SNZ3P43545 298 aa2.4□□□□□ -2.03
TCA17YEL048C MCM22P47167 239 aa2.4□□□□□ -2.03
TCA17YEL048C CTF19Q02732 369 aa2.4□□□□□ -2.03
TCA17YEL048C YML108WQ03759 105 aa2.4□□□□□ -2.03
TCA17YEL048C SEI1Q06058 285 aa2.4□□□□□ -2.03
TCA17YEL048C YOR283WQ12040 230 aaKnown RBP2.4□□□□□ -2.03
TCA17YEL048C YBL008W-AQ3E821 79 aa2.4□□□□□ -2.03
TCA17YEL048C JIP3O13555 125 aa2.39□□□□□ -2.03
TCA17YEL048C BCY1P07278 416 aaKnown RBP2.39□□□□□ -2.03
TCA17YEL048C YBR121C-AP0C5L4 52 aa2.39□□□□□ -2.03
TCA17YEL048C STE18P18852 110 aa2.39□□□□□ -2.03
TCA17YEL048C EHD3P28817 500 aa2.39□□□□□ -2.03
TCA17YEL048C GDH2P33327 1092 aaKnown RBP2.39□□□□□ -2.03
TCA17YEL048C YER189WP40104 122 aa2.39□□□□□ -2.03
TCA17YEL048C MIC26P50087 233 aa2.39□□□□□ -2.03
TCA17YEL048C SNZ2P53824 298 aa2.39□□□□□ -2.03
TCA17YEL048C YPL039WQ03080 316 aa2.39□□□□□ -2.03
TCA17YEL048C DCR2Q05924 578 aa2.39□□□□□ -2.03
TCA17YEL048C SLD7Q08457 257 aa2.39□□□□□ -2.03
TCA17YEL048C YOR186WQ08560 144 aa2.39□□□□□ -2.03
TCA17YEL048C PST1Q12355 444 aa2.39□□□□□ -2.03
TCA17YEL048C PAN1P32521 1480 aa2.39□□□□□ -2.03
TCA17YEL048C RNP1P32385 249 aa2.38□□□□□ -2.03
TCA17YEL048C ECM13P38195 257 aa2.38□□□□□ -2.03
TCA17YEL048C YMR144WP40214 342 aaKnown RBP2.38□□□□□ -2.03
TCA17YEL048C YJL028WP47062 111 aa2.38□□□□□ -2.03
TCA17YEL048C ILM1P47155 203 aa2.38□□□□□ -2.03
TCA17YEL048C YMR226CQ05016 267 aaKnown RBP2.38□□□□□ -2.03
TCA17YEL048C YMR31P19955 123 aa2.37□□□□□ -2.03
TCA17YEL048C PPH21P23594 369 aa2.37□□□□□ -2.03
TCA17YEL048C CDC10P25342 322 aaKnown RBP2.37□□□□□ -2.03
TCA17YEL048C RIB1P38066 345 aa2.37□□□□□ -2.03
TCA17YEL048C MAL32P38158 584 aa2.37□□□□□ -2.03
TCA17YEL048C SIP3P38717 1229 aa2.37□□□□□ -2.03
TCA17YEL048C MAL12P53341 584 aa2.37□□□□□ -2.03
TCA17YEL048C SUE1Q06524 206 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms