RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W MDH2P22133 377 aa1.48□□□□□ -2.17
CFT1YDR301W PPA2P28239 310 aa1.48□□□□□ -2.17
CFT1YDR301W ERG24P32462 438 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W MTH1P35198 433 aa1.48□□□□□ -2.17
CFT1YDR301W ARC40P38328 384 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W GRE3P38715 327 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
CFT1YDR301W YHK8P38776 514 aa1.48□□□□□ -2.17
CFT1YDR301W SFH5P47008 294 aa1.48□□□□□ -2.17
CFT1YDR301W EFM3P47163 339 aa1.48□□□□□ -2.17
CFT1YDR301W SHE4P51534 789 aa1.48□□□□□ -2.17
CFT1YDR301W KAP120Q02932 1032 aa1.48□□□□□ -2.17
CFT1YDR301W GPN3Q06543 272 aa1.48□□□□□ -2.17
CFT1YDR301W MRX9Q07349 420 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W LYS21Q12122 440 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W COX17Q12287 69 aa1.48□□□□□ -2.17
CFT1YDR301W YJR112W-AQ3E743 109 aa1.48□□□□□ -2.17
CFT1YDR301W YBR126W-AQ8TGU7 68 aa1.48□□□□□ -2.17
CFT1YDR301W YBR056W-AI2HB52 66 aa1.48□□□□□ -2.17
CFT1YDR301W AAC1P04710 309 aa1.48□□□□□ -2.17
CFT1YDR301W MET3P08536 511 aa1.48□□□□□ -2.17
CFT1YDR301W CUP1-1P0CX80 61 aa1.48□□□□□ -2.17
CFT1YDR301W CUP1-2P0CX81 61 aa1.48□□□□□ -2.17
CFT1YDR301W RPL3P14126 387 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W YCR101CP25607 182 aa1.48□□□□□ -2.17
CFT1YDR301W ERG9P29704 444 aa1.48□□□□□ -2.17
CFT1YDR301W PPZ2P33329 710 aa1.48□□□□□ -2.17
CFT1YDR301W MRPL27P36526 146 aaPredicted RBP1.48□□□□□ -2.17
CFT1YDR301W TCM62P38228 572 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W CIN2P46670 268 aa1.48□□□□□ -2.17
CFT1YDR301W CTK2P46962 323 aa1.48□□□□□ -2.17
CFT1YDR301W LYS20P48570 428 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W ERV29P53337 310 aa1.48□□□□□ -2.17
CFT1YDR301W YNL046WP53956 172 aa1.48□□□□□ -2.17
CFT1YDR301W ACS1Q01574 713 aa1.48□□□□□ -2.17
CFT1YDR301W DIG2Q03373 323 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W HRT1Q08273 121 aa1.48□□□□□ -2.17
CFT1YDR301W ALG6Q12001 544 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W USB1Q12208 290 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W POM34Q12445 299 aa1.48□□□□□ -2.17
CFT1YDR301W TEL1P38110 2787 aa1.48□□□□□ -2.17
CFT1YDR301W YLR302CO13544 120 aa1.48□□□□□ -2.17
CFT1YDR301W IPP1P00817 287 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W RPL6BP05739 176 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W PET54P10834 293 aa1.48□□□□□ -2.17
CFT1YDR301W CTA1P15202 515 aa1.48□□□□□ -2.17
CFT1YDR301W ERS1P17261 260 aa1.48□□□□□ -2.17
CFT1YDR301W DEG1P31115 442 aaKnown RBP1.48□□□□□ -2.17
CFT1YDR301W AFG1P32317 509 aa1.48□□□□□ -2.17
CFT1YDR301W COQ2P32378 372 aa1.48□□□□□ -2.17
CFT1YDR301W YOX1P34161 385 aa1.48□□□□□ -2.17
CFT1YDR301W SRL3P36167 246 aa1.48□□□□□ -2.17
CFT1YDR301W FAT1P38225 669 aa1.48□□□□□ -2.17
CFT1YDR301W MTC6P38849 526 aa1.48□□□□□ -2.17
CFT1YDR301W EGT2P42835 1041 aa1.48□□□□□ -2.17
CFT1YDR301W LOH1P47055 219 aa1.48□□□□□ -2.17
CFT1YDR301W NSA1P53136 463 aaPredicted RBP1.48□□□□□ -2.17
CFT1YDR301W NNT1Q05874 261 aa1.48□□□□□ -2.17
CFT1YDR301W YPR098CQ06089 161 aa1.48□□□□□ -2.17
CFT1YDR301W KEI1Q06346 221 aa1.48□□□□□ -2.17
CFT1YDR301W ATG41Q12048 136 aa1.48□□□□□ -2.17
CFT1YDR301W IES3Q12345 250 aa1.48□□□□□ -2.17
CFT1YDR301W ORT1Q12375 292 aa1.48□□□□□ -2.17
CFT1YDR301W MET2P08465 486 aa1.47□□□□□ -2.17
CFT1YDR301W PET122P10355 254 aa1.47□□□□□ -2.17
CFT1YDR301W ARO3P14843 370 aaKnown RBP1.47□□□□□ -2.17
CFT1YDR301W FRS1P15624 595 aaKnown RBP1.47□□□□□ -2.17
CFT1YDR301W APA2P22108 325 aa1.47□□□□□ -2.17
CFT1YDR301W FUN26P31381 517 aa1.47□□□□□ -2.17
CFT1YDR301W SHE2P36068 246 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
CFT1YDR301W MRPL3P36516 390 aa1.47□□□□□ -2.17
CFT1YDR301W FRM2P37261 193 aa1.47□□□□□ -2.17
CFT1YDR301W ERJ5P43613 295 aaPredicted RBP1.47□□□□□ -2.17
CFT1YDR301W AAH1P53909 347 aa1.47□□□□□ -2.17
CFT1YDR301W RCE1Q03530 315 aa1.47□□□□□ -2.17
CFT1YDR301W YAP6Q03935 383 aa1.47□□□□□ -2.17
CFT1YDR301W CRR1Q05790 422 aa1.47□□□□□ -2.17
CFT1YDR301W RRS1Q08746 203 aaKnown RBP1.47□□□□□ -2.17
CFT1YDR301W TDH3P00359 332 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
CFT1YDR301W CDC28P00546 298 aaKnown RBP1.47□□□□□ -2.17
CFT1YDR301W CAP2P13517 287 aa1.47□□□□□ -2.17
CFT1YDR301W BUD23P25627 275 aaPredicted RBP1.47□□□□□ -2.17
CFT1YDR301W RFA3P26755 122 aaKnown RBP1.47□□□□□ -2.17
CFT1YDR301W RIB7P33312 244 aa1.47□□□□□ -2.17
CFT1YDR301W SNC2P33328 115 aa1.47□□□□□ -2.17
CFT1YDR301W SPT10P35208 640 aa1.47□□□□□ -2.17
CFT1YDR301W COS9P36034 407 aa1.47□□□□□ -2.17
CFT1YDR301W RCN1P36054 211 aa1.47□□□□□ -2.17
CFT1YDR301W SWD2P36104 329 aaPredicted RBP1.47□□□□□ -2.17
CFT1YDR301W PHO90P39535 881 aa1.47□□□□□ -2.17
CFT1YDR301W YGL159WP53110 370 aa1.47□□□□□ -2.17
CFT1YDR301W POP6P53218 158 aa1.47□□□□□ -2.17
CFT1YDR301W YNR048WP53740 393 aa1.47□□□□□ -2.17
CFT1YDR301W MRPL22P53881 309 aa1.47□□□□□ -2.17
CFT1YDR301W YDC1Q02896 317 aa1.47□□□□□ -2.17
CFT1YDR301W NRG1Q03125 231 aa1.47□□□□□ -2.17
CFT1YDR301W SNZ1Q03148 297 aa1.47□□□□□ -2.17
CFT1YDR301W RAF1Q06891 181 aa1.47□□□□□ -2.17
CFT1YDR301W PML1Q07930 204 aaPredicted RBP1.47□□□□□ -2.17
CFT1YDR301W SRL2Q12020 392 aa1.47□□□□□ -2.17
CFT1YDR301W HMS1Q12398 434 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms