RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C IMP3P32899 183 aaPredicted RBP3.47□□□□□ -1.85
PRP11YDL043C SKT5P34226 696 aa3.47□□□□□ -1.85
PRP11YDL043C IML3P38265 245 aa3.47□□□□□ -1.85
PRP11YDL043C HIS2P38635 335 aa3.47□□□□□ -1.85
PRP11YDL043C IKI1P38874 309 aa3.47□□□□□ -1.85
PRP11YDL043C YER079WP40052 210 aaKnown RBP3.47□□□□□ -1.85
PRP11YDL043C SHO1P40073 367 aa3.47□□□□□ -1.85
PRP11YDL043C GWT1P47026 490 aa3.47□□□□□ -1.85
PRP11YDL043C FMP48P53233 369 aa3.47□□□□□ -1.85
PRP11YDL043C FRE4P53746 719 aa3.47□□□□□ -1.85
PRP11YDL043C SLM2P53955 656 aa3.47□□□□□ -1.85
PRP11YDL043C YDR366CP87287 132 aa3.47□□□□□ -1.85
PRP11YDL043C STP1Q00947 519 aa3.47□□□□□ -1.85
PRP11YDL043C CGI121Q03705 181 aaKnown RBP3.47□□□□□ -1.85
PRP11YDL043C YDR415CQ04033 374 aaPredicted RBP3.47□□□□□ -1.85
PRP11YDL043C PRM6Q04705 352 aa3.47□□□□□ -1.85
PRP11YDL043C TVP18Q04767 167 aa3.47□□□□□ -1.85
PRP11YDL043C SCP1Q08873 200 aa3.47□□□□□ -1.85
PRP11YDL043C FDH1Q08911 376 aa3.47□□□□□ -1.85
PRP11YDL043C GRE1Q08969 168 aa3.47□□□□□ -1.85
PRP11YDL043C FSF1Q12029 327 aaKnown RBP3.47□□□□□ -1.85
PRP11YDL043C SPC3Q12133 184 aa3.47□□□□□ -1.85
PRP11YDL043C MDM32Q12171 622 aa3.47□□□□□ -1.85
PRP11YDL043C YCT1Q12235 531 aa3.47□□□□□ -1.85
PRP11YDL043C PKH2Q12236 1081 aaKnown RBP3.47□□□□□ -1.85
PRP11YDL043C YPR014CQ6B0W2 109 aa3.47□□□□□ -1.85
PRP11YDL043C DNA2P38859 1522 aa3.47□□□□□ -1.85
PRP11YDL043C NUP159P40477 1460 aa3.47□□□□□ -1.85
PRP11YDL043C ESP1Q03018 1630 aa3.46□□□□□ -1.86
PRP11YDL043C SAL1D6W196 494 aa3.46□□□□□ -1.86
PRP11YDL043C RPS28BP0C0X0 67 aaKnown RBP3.46□□□□□ -1.86
PRP11YDL043C DDI2P0CH63 225 aa3.46□□□□□ -1.86
PRP11YDL043C DDI3P0CH64 225 aa3.46□□□□□ -1.86
PRP11YDL043C ATR1P13090 542 aa3.46□□□□□ -1.86
PRP11YDL043C MGT1P26188 188 aa3.46□□□□□ -1.86
PRP11YDL043C HOM6P31116 359 aaKnown RBP3.46□□□□□ -1.86
PRP11YDL043C MSK1P32048 576 aa3.46□□□□□ -1.86
PRP11YDL043C PTM1P32857 523 aa3.46□□□□□ -1.86
PRP11YDL043C ECT1P33412 323 aa3.46□□□□□ -1.86
PRP11YDL043C SSS1P35179 80 aa3.46□□□□□ -1.86
PRP11YDL043C CBT1P36038 271 aaPredicted RBP3.46□□□□□ -1.86
PRP11YDL043C PRY2P36110 329 aa3.46□□□□□ -1.86
PRP11YDL043C YHR177WP38867 453 aa3.46□□□□□ -1.86
PRP11YDL043C COG3P40094 801 aa3.46□□□□□ -1.86
PRP11YDL043C YIL152WP40455 235 aa3.46□□□□□ -1.86
PRP11YDL043C MEP2P41948 499 aa3.46□□□□□ -1.86
PRP11YDL043C YFR057WP43625 151 aa3.46□□□□□ -1.86
PRP11YDL043C YHC3P47040 408 aa3.46□□□□□ -1.86
PRP11YDL043C XPT1P47165 209 aa3.46□□□□□ -1.86
PRP11YDL043C YGL235WP53071 178 aa3.46□□□□□ -1.86
PRP11YDL043C YGL039WP53183 348 aaKnown RBP3.46□□□□□ -1.86
PRP11YDL043C POP6P53218 158 aa3.46□□□□□ -1.86
PRP11YDL043C GTR2P53290 341 aa3.46□□□□□ -1.86
PRP11YDL043C BOR1P53838 576 aa3.46□□□□□ -1.86
PRP11YDL043C ARK1P53974 638 aa3.46□□□□□ -1.86
PRP11YDL043C YPL068CQ02749 293 aa3.46□□□□□ -1.86
PRP11YDL043C STD1Q02794 444 aa3.46□□□□□ -1.86
PRP11YDL043C CAB5Q03941 241 aa3.46□□□□□ -1.86
PRP11YDL043C YET2Q04210 160 aa3.46□□□□□ -1.86
PRP11YDL043C SEI1Q06058 285 aa3.46□□□□□ -1.86
PRP11YDL043C DAP1Q12091 152 aa3.46□□□□□ -1.86
PRP11YDL043C PST2Q12335 198 aaKnown RBP3.46□□□□□ -1.86
PRP11YDL043C RDI1Q12434 202 aa3.46□□□□□ -1.86
PRP11YDL043C RPS28AQ3E7X9 67 aaPredicted RBP3.46□□□□□ -1.86
PRP11YDL043C GCN2P15442 1659 aa3.46□□□□□ -1.86
PRP11YDL043C YSP2Q06681 1438 aa3.45□□□□□ -1.86
PRP11YDL043C PDR5P33302 1511 aaKnown RBP3.45□□□□□ -1.86
PRP11YDL043C COX5BP00425 151 aa3.45□□□□□ -1.86
PRP11YDL043C REP2P03872 296 aa3.45□□□□□ -1.86
PRP11YDL043C PHO2P07269 559 aa3.45□□□□□ -1.86
PRP11YDL043C RPL12AP0CX53 165 aaKnown RBP3.45□□□□□ -1.86
PRP11YDL043C RPL12BP0CX54 165 aa3.45□□□□□ -1.86
PRP11YDL043C RPS18AP0CX55 146 aaKnown RBP3.45□□□□□ -1.86
PRP11YDL043C RPS18BP0CX56 146 aaPredicted RBP3.45□□□□□ -1.86
PRP11YDL043C SPO12P17123 173 aa3.45□□□□□ -1.86
PRP11YDL043C RFA3P26755 122 aaKnown RBP3.45□□□□□ -1.86
PRP11YDL043C ARO2P28777 376 aaKnown RBP3.45□□□□□ -1.86
PRP11YDL043C SKN1P33336 771 aa3.45□□□□□ -1.86
PRP11YDL043C SOL2P37262 315 aa3.45□□□□□ -1.86
PRP11YDL043C DOG2P38773 246 aa3.45□□□□□ -1.86
PRP11YDL043C IPI1P38803 334 aaPredicted RBP3.45□□□□□ -1.86
PRP11YDL043C DIM1P41819 318 aaKnown RBP3.45□□□□□ -1.86
PRP11YDL043C CIN2P46670 268 aa3.45□□□□□ -1.86
PRP11YDL043C AIM23P47015 356 aa3.45□□□□□ -1.86
PRP11YDL043C COS10P52924 374 aa3.45□□□□□ -1.86
PRP11YDL043C TPN1P53099 579 aa3.45□□□□□ -1.86
PRP11YDL043C YNR048WP53740 393 aa3.45□□□□□ -1.86
PRP11YDL043C TIM8P57744 87 aa3.45□□□□□ -1.86
PRP11YDL043C ACT1P60010 375 aaKnown RBP3.45□□□□□ -1.86
PRP11YDL043C TMA23Q03525 211 aa3.45□□□□□ -1.86
PRP11YDL043C BET5Q03630 159 aa3.45□□□□□ -1.86
PRP11YDL043C AIM36Q03798 255 aa3.45□□□□□ -1.86
PRP11YDL043C NAT4Q04751 285 aa3.45□□□□□ -1.86
PRP11YDL043C ADH6Q04894 360 aaKnown RBP3.45□□□□□ -1.86
PRP11YDL043C YDR278CQ05612 105 aa3.45□□□□□ -1.86
PRP11YDL043C SUE1Q06524 206 aa3.45□□□□□ -1.86
PRP11YDL043C ATG10Q07879 167 aa3.45□□□□□ -1.86
PRP11YDL043C PEX27Q08580 376 aa3.45□□□□□ -1.86
PRP11YDL043C POM33Q12164 279 aa3.45□□□□□ -1.86
PRP11YDL043C YDR018CQ12185 396 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms