RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W GIM3P53900 129 aa1.66□□□□□ -2.14
SNC1YAL030W YMR114CQ04471 368 aaKnown RBP1.66□□□□□ -2.14
SNC1YAL030W SEI1Q06058 285 aa1.66□□□□□ -2.14
SNC1YAL030W SYC1Q08553 188 aaPredicted RBP1.66□□□□□ -2.14
SNC1YAL030W RRS1Q08746 203 aaKnown RBP1.66□□□□□ -2.14
SNC1YAL030W GET4Q12125 312 aa1.66□□□□□ -2.14
SNC1YAL030W SMT3Q12306 101 aaKnown RBP1.66□□□□□ -2.14
SNC1YAL030W ATG5Q12380 294 aa1.66□□□□□ -2.14
SNC1YAL030W DCN1Q12395 269 aa1.66□□□□□ -2.14
SNC1YAL030W FLO11P08640 1367 aa1.65□□□□□ -2.15
SNC1YAL030W YOL163WP0CF20 169 aa1.65□□□□□ -2.15
SNC1YAL030W SNA3P14359 133 aa1.65□□□□□ -2.15
SNC1YAL030W YPK2P18961 677 aa1.65□□□□□ -2.15
SNC1YAL030W CDC10P25342 322 aaKnown RBP1.65□□□□□ -2.15
SNC1YAL030W NTF2P33331 125 aaKnown RBP1.65□□□□□ -2.15
SNC1YAL030W ECM13P38195 257 aa1.65□□□□□ -2.15
SNC1YAL030W ARN2P38724 620 aa1.65□□□□□ -2.15
SNC1YAL030W TRR2P38816 342 aa1.65□□□□□ -2.15
SNC1YAL030W TEM1P38987 245 aa1.65□□□□□ -2.15
SNC1YAL030W RFC4P40339 323 aaKnown RBP1.65□□□□□ -2.15
SNC1YAL030W YJR149WP47177 404 aa1.65□□□□□ -2.15
SNC1YAL030W CWC23P52868 283 aaPredicted RBP1.65□□□□□ -2.15
SNC1YAL030W OSH6Q02201 448 aa1.65□□□□□ -2.15
SNC1YAL030W GOT1Q03554 138 aa1.65□□□□□ -2.15
SNC1YAL030W ECM11Q04110 302 aa1.65□□□□□ -2.15
SNC1YAL030W MRX8Q05473 314 aa1.65□□□□□ -2.15
SNC1YAL030W CDC123Q05791 360 aa1.65□□□□□ -2.15
SNC1YAL030W YPL264CQ08980 353 aa1.65□□□□□ -2.15
SNC1YAL030W YDL211CQ12121 372 aa1.65□□□□□ -2.15
SNC1YAL030W JLP1Q12358 412 aa1.65□□□□□ -2.15
SNC1YAL030W PAN1P32521 1480 aa1.64□□□□□ -2.15
SNC1YAL030W ZWF1P11412 505 aaKnown RBP1.64□□□□□ -2.15
SNC1YAL030W YAK1P14680 807 aa1.64□□□□□ -2.15
SNC1YAL030W CPT1P17898 393 aa1.64□□□□□ -2.15
SNC1YAL030W ERD2P18414 219 aa1.64□□□□□ -2.15
SNC1YAL030W PRE7P23724 241 aaKnown RBP1.64□□□□□ -2.15
SNC1YAL030W CBT1P36038 271 aaPredicted RBP1.64□□□□□ -2.15
SNC1YAL030W TRM7P38238 310 aaKnown RBP1.64□□□□□ -2.15
SNC1YAL030W SLX1P38324 304 aa1.64□□□□□ -2.15
SNC1YAL030W SUR2P38992 349 aa1.64□□□□□ -2.15
SNC1YAL030W YMR144WP40214 342 aaKnown RBP1.64□□□□□ -2.15
SNC1YAL030W SNZ3P43545 298 aa1.64□□□□□ -2.15
SNC1YAL030W MGA1P53050 456 aa1.64□□□□□ -2.15
SNC1YAL030W FLC3P53121 802 aa1.64□□□□□ -2.15
SNC1YAL030W SNZ2P53824 298 aa1.64□□□□□ -2.15
SNC1YAL030W YNL046WP53956 172 aa1.64□□□□□ -2.15
SNC1YAL030W YPL039WQ03080 316 aa1.64□□□□□ -2.15
SNC1YAL030W YPL150WQ12152 901 aa1.64□□□□□ -2.15
SNC1YAL030W TPO4Q12256 659 aa1.64□□□□□ -2.15
SNC1YAL030W YLR126CQ12288 251 aa1.64□□□□□ -2.15
SNC1YAL030W YBL008W-AQ3E821 79 aa1.64□□□□□ -2.15
SNC1YAL030W ISD11Q6Q560 94 aa1.64□□□□□ -2.15
SNC1YAL030W NUP157P40064 1391 aaKnown RBP1.63□□□□□ -2.15
SNC1YAL030W PPH21P23594 369 aa1.63□□□□□ -2.15
SNC1YAL030W MGM101P32787 269 aaKnown RBP1.63□□□□□ -2.15
SNC1YAL030W SFC1P33303 322 aa1.63□□□□□ -2.15
SNC1YAL030W TAF14P35189 244 aa1.63□□□□□ -2.15
SNC1YAL030W CAB3P36076 571 aa1.63□□□□□ -2.15
SNC1YAL030W SPL2P38839 148 aa1.63□□□□□ -2.15
SNC1YAL030W IKI1P38874 309 aa1.63□□□□□ -2.15
SNC1YAL030W YNL194CP40169 301 aa1.63□□□□□ -2.15
SNC1YAL030W YJL028WP47062 111 aa1.63□□□□□ -2.15
SNC1YAL030W ADO1P47143 340 aaKnown RBP1.63□□□□□ -2.15
SNC1YAL030W OST3P48439 350 aa1.63□□□□□ -2.15
SNC1YAL030W TRM9P49957 279 aa1.63□□□□□ -2.15
SNC1YAL030W BRR6P53062 197 aa1.63□□□□□ -2.15
SNC1YAL030W GET1P53192 235 aa1.63□□□□□ -2.15
SNC1YAL030W FYV6P53913 173 aa1.63□□□□□ -2.15
SNC1YAL030W YOR186WQ08560 144 aa1.63□□□□□ -2.15
SNC1YAL030W ABP140Q08641 628 aaKnown RBP1.63□□□□□ -2.15
SNC1YAL030W YPS3Q12303 508 aa1.63□□□□□ -2.15
SNC1YAL030W PRR2Q12310 699 aa1.63□□□□□ -2.15
SNC1YAL030W TIM22Q12328 207 aa1.63□□□□□ -2.15
SNC1YAL030W EMP46Q12396 444 aa1.63□□□□□ -2.15
SNC1YAL030W YPL247CQ12523 523 aa1.63□□□□□ -2.15
SNC1YAL030W SIR4P11978 1358 aa1.62□□□□□ -2.15
SNC1YAL030W YDR157WA0A023PZE8 133 aa1.62□□□□□ -2.15
SNC1YAL030W YEL009C-AA0A023PZF2 135 aa1.62□□□□□ -2.15
SNC1YAL030W HTB1P02293 131 aaKnown RBP1.62□□□□□ -2.15
SNC1YAL030W HTB2P02294 131 aa1.62□□□□□ -2.15
SNC1YAL030W RPL28P02406 149 aaKnown RBP1.62□□□□□ -2.15
SNC1YAL030W MET2P08465 486 aa1.62□□□□□ -2.15
SNC1YAL030W IDH1P28834 360 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
SNC1YAL030W ASF2P32448 525 aaPredicted RBP1.62□□□□□ -2.15
SNC1YAL030W YBL081WP38180 368 aaKnown RBP1.62□□□□□ -2.15
SNC1YAL030W SSH1P38353 490 aaKnown RBP1.62□□□□□ -2.15
SNC1YAL030W YER189WP40104 122 aa1.62□□□□□ -2.15
SNC1YAL030W YRB2P40517 327 aa1.62□□□□□ -2.15
SNC1YAL030W YFR045WP43617 309 aa1.62□□□□□ -2.15
SNC1YAL030W NUP57P48837 541 aa1.62□□□□□ -2.15
SNC1YAL030W NIF3P53081 288 aa1.62□□□□□ -2.15
SNC1YAL030W TOS8P53147 276 aa1.62□□□□□ -2.15
SNC1YAL030W YGL034CP53186 121 aa1.62□□□□□ -2.15
SNC1YAL030W HST4P53688 370 aa1.62□□□□□ -2.15
SNC1YAL030W DID2P69771 204 aa1.62□□□□□ -2.15
SNC1YAL030W YML108WQ03759 105 aa1.62□□□□□ -2.15
SNC1YAL030W EMI1Q04406 187 aa1.62□□□□□ -2.15
SNC1YAL030W YDR222WQ04925 415 aa1.62□□□□□ -2.15
SNC1YAL030W HEM25Q07534 307 aa1.62□□□□□ -2.15
SNC1YAL030W YBL112CQ3E7Y4 105 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 87.5 ms