RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 FUT10Q6P4F1 479 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 Q6ZS52 159 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 METTL3Q86U44 580 aaKnown RBP9.11□□□□□ -0.95
SCARB2-226ENST00000640916 LAPTM4BQ86VI4 370 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 WDR5BQ86VZ2 330 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 MB21D2Q8IYB1 491 aaPredicted RBP9.11□□□□□ -0.95
SCARB2-226ENST00000640916 SMAP1Q8IYB5 467 aaPredicted RBP9.11□□□□□ -0.95
SCARB2-226ENST00000640916 C12orf50Q8NA57 414 aaPredicted RBP9.11□□□□□ -0.95
SCARB2-226ENST00000640916 TATDN2Q93075 761 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 TCEAL3Q969E4 200 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 LOXL4Q96JB6 756 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 GAD1Q99259 594 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 LZTS2Q9BRK4 669 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 MINDY3Q9H8M7 445 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 ZNF334Q9HCZ1 680 aaPredicted RBP9.11□□□□□ -0.95
SCARB2-226ENST00000640916 RIC8AQ9NPQ8 531 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 TRPV5Q9NQA5 729 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 RBM12Q9NTZ6 932 aaKnown RBP9.11□□□□□ -0.95
SCARB2-226ENST00000640916 GPSM3Q9Y4H4 160 aa9.11□□□□□ -0.95
SCARB2-226ENST00000640916 KIF26AQ9ULI4 1882 aaPredicted RBP9.11□□□□□ -0.95
SCARB2-226ENST00000640916 ERICH2A1L162 156 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 E7EWF7 191 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 ARNTLO00327 626 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 EDIL3O43854 480 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 FOSP01100 380 aaPredicted RBP9.1□□□□□ -0.95
SCARB2-226ENST00000640916 CYP3A4P08684 503 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 CEBPBP17676 345 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 RXRAP19793 462 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 CDC42EP1Q00587 391 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 PABPC1LQ4VXU2 614 aaKnown RBP9.1□□□□□ -0.95
SCARB2-226ENST00000640916 RNF43Q68DV7 783 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 CATSPER4Q7RTX7 472 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 HEATR3Q7Z4Q2 680 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 KBTBD6Q86V97 674 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 ZNF410Q86VK4 478 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 SPNS2Q8IVW8 549 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 CTCFLQ8NI51 663 aaPredicted RBP9.1□□□□□ -0.95
SCARB2-226ENST00000640916 LNX1Q8TBB1 728 aaPredicted RBP9.1□□□□□ -0.95
SCARB2-226ENST00000640916 RABGGTAQ92696 567 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 LENG9Q96B70 501 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 ZFP42Q96MM3 310 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 SH2D3AQ9BRG2 576 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 ZNF577Q9BSK1 485 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 TMUB1Q9BVT8 246 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 NIFKQ9BYG3 293 aaKnown RBP9.1□□□□□ -0.95
SCARB2-226ENST00000640916 NRBP2Q9NSY0 501 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 TBC1D22BQ9NU19 505 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 GDE1Q9NZC3 331 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 CACNG4Q9UBN1 327 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 RCAN3Q9UKA8 241 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 ADAM28Q9UKQ2 775 aa9.1□□□□□ -0.95
SCARB2-226ENST00000640916 ASCC3Q8N3C0 2202 aaKnown RBP9.1□□□□□ -0.95
SCARB2-226ENST00000640916 ATG2BQ96BY7 2078 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 MAST4O15021 2626 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 C4orf47A7E2U8 309 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 CCNE1P24864 410 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 MLH1P40692 756 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 RBM25P49756 843 aaKnown RBP9.09□□□□□ -0.95
SCARB2-226ENST00000640916 GNAQP50148 359 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 SCNN1GP51170 649 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 PTH1RQ03431 593 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 TRDNQ13061 729 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 FAM78AQ5JUQ0 283 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 PRSS36Q5K4E3 855 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 AXDND1Q5T1B0 1012 aaPredicted RBP9.09□□□□□ -0.95
SCARB2-226ENST00000640916 SH3PXD2AQ5TCZ1 1133 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 VITQ6UXI7 678 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 CEP68Q76N32 757 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 PACS2Q86VP3 889 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 RHPN2Q8IUC4 686 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 CCDC82Q8N4S0 544 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 SLC7A14Q8TBB6 771 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 GAB3Q8WWW8 586 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 PAAF1Q9BRP4 392 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 COLEC11Q9BWP8 271 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 EIF2AQ9BY44 585 aaKnown RBP9.09□□□□□ -0.95
SCARB2-226ENST00000640916 INO80BQ9C086 356 aaPredicted RBP9.09□□□□□ -0.95
SCARB2-226ENST00000640916 BRD9Q9H8M2 597 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 AVENQ9NQS1 362 aaPredicted RBP9.09□□□□□ -0.95
SCARB2-226ENST00000640916 SUCLA2Q9P2R7 463 aaPredicted RBP9.09□□□□□ -0.95
SCARB2-226ENST00000640916 POLIQ9UNA4 740 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 PIAS3Q9Y6X2 628 aa9.09□□□□□ -0.95
SCARB2-226ENST00000640916 XYLBO75191 536 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 RHOP08100 348 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 ZNF76P36508 570 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 MPLP40238 635 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 CREMQ03060 361 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 AP3B2Q13367 1082 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 UVSSAQ2YD98 709 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 MTERF2Q49AM1 385 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 LIN9Q5TKA1 542 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 C19orf48Q6RUI8 117 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 NUDT18Q6ZVK8 323 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 TMTC3Q6ZXV5 915 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 PDZD3Q86UT5 571 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 RAB11FIP4Q86YS3 637 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 NCOA7Q8NI08 942 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 ADAM32Q8TC27 787 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 PIK3R5Q8WYR1 880 aa9.08□□□□□ -0.96
SCARB2-226ENST00000640916 TCEAL4Q96EI5 215 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms