RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 PLCG1P19174 1290 aa27.63■■■□□ 2.01
VEGFA-232ENST00000640653 RESTQ13127 1097 aa27.63■■■□□ 2.01
VEGFA-232ENST00000640653 KARSQ15046 597 aaKnown RBP27.63■■■□□ 2.01
VEGFA-232ENST00000640653 GLRA4Q5JXX5 417 aa27.63■■■□□ 2.01
VEGFA-232ENST00000640653 CEP120Q8N960 986 aa27.63■■■□□ 2.01
VEGFA-232ENST00000640653 UROC1Q96N76 676 aa27.63■■■□□ 2.01
VEGFA-232ENST00000640653 TTPALQ9BTX7 342 aa27.63■■■□□ 2.01
VEGFA-232ENST00000640653 CLIC4Q9Y696 253 aa27.63■■■□□ 2.01
VEGFA-232ENST00000640653 TOM1L1O75674 476 aa27.62■■■□□ 2.01
VEGFA-232ENST00000640653 BRD1O95696 1058 aa27.62■■■□□ 2.01
VEGFA-232ENST00000640653 OSTNP61366 133 aa27.62■■■□□ 2.01
VEGFA-232ENST00000640653 ZXDAP98168 799 aa27.62■■■□□ 2.01
VEGFA-232ENST00000640653 CACNB1Q02641 598 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-232ENST00000640653 DHX8Q14562 1220 aaKnown RBP27.62■■■□□ 2.01
VEGFA-232ENST00000640653 C15orf39Q6ZRI6 1047 aa27.62■■■□□ 2.01
VEGFA-232ENST00000640653 CMASQ8NFW8 434 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-232ENST00000640653 HDAC7Q8WUI4 952 aa27.62■■■□□ 2.01
VEGFA-232ENST00000640653 RAD54LQ92698 747 aa27.62■■■□□ 2.01
VEGFA-232ENST00000640653 ACAP3Q96P50 834 aa27.62■■■□□ 2.01
VEGFA-232ENST00000640653 C2CD4DB7Z1M9 353 aa27.61■■■□□ 2.01
VEGFA-232ENST00000640653 PTPAQ15257 358 aa27.61■■■□□ 2.01
VEGFA-232ENST00000640653 FAM171A1Q5VUB5 890 aa27.61■■■□□ 2.01
VEGFA-232ENST00000640653 ZPBP2Q6X784 338 aa27.61■■■□□ 2.01
VEGFA-232ENST00000640653 TDRD5Q8NAT2 981 aaKnown RBP27.61■■■□□ 2.01
VEGFA-232ENST00000640653 REEP2Q9BRK0 252 aa27.61■■■□□ 2.01
VEGFA-232ENST00000640653 CCSER1Q9C0I3 900 aa27.61■■■□□ 2.01
VEGFA-232ENST00000640653 BLOC1S4Q9NUP1 217 aa27.61■■■□□ 2.01
VEGFA-232ENST00000640653 SLC38A7Q9NVC3 462 aa27.61■■■□□ 2.01
VEGFA-232ENST00000640653 ANKFY1Q9P2R3 1169 aa27.61■■■□□ 2.01
VEGFA-232ENST00000640653 USTQ9Y2C2 406 aa27.61■■■□□ 2.01
VEGFA-232ENST00000640653 SMIM28A0A1B0GU29 152 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 TMEM189-UBE2V1I3L0A0 370 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 ABLIM1O14639 778 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 FAM13AO94988 1023 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 KRT18P05783 430 aaKnown RBP27.6■■■□□ 2.01
VEGFA-232ENST00000640653 HARSP12081 509 aaKnown RBP27.6■■■□□ 2.01
VEGFA-232ENST00000640653 SCP2P22307 547 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 NCKAP1LP55160 1127 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 MCM6Q14566 821 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 NOLC1Q14978 699 aaKnown RBP eCLIP27.6■■■□□ 2.01
VEGFA-232ENST00000640653 PTPN21Q16825 1174 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 XKR4Q5GH76 650 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 RTP2Q5QGT7 225 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 PDXDC1Q6P996 788 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 DCLRE1AQ6PJP8 1040 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 ALKAL1Q6UXT8 129 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 CYP26C1Q6V0L0 522 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 CEP57Q86XR8 500 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 PALB2Q86YC2 1186 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 PLEKHA4Q9H4M7 779 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 FOXD4L1Q9NU39 408 aa27.6■■■□□ 2.01
VEGFA-232ENST00000640653 B3GAT3O94766 335 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 PRSS55Q6UWB4 352 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-232ENST00000640653 TRIM67Q6ZTA4 783 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 CCDC149Q6ZUS6 474 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 GLYCTKQ8IVS8 523 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 PLCD3Q8N3E9 789 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 MYCT1Q8N699 235 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 LRRC15Q8TF66 581 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 PIK3R5Q8WYR1 880 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 LARP4BQ92615 738 aaKnown RBP27.59■■■□□ 2.01
VEGFA-232ENST00000640653 BICD1Q96G01 975 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 ZBTB45Q96K62 511 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-232ENST00000640653 SNX27Q96L92 541 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 ZSCAN16Q9H4T2 348 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-232ENST00000640653 PARVGQ9HBI0 331 aa27.59■■■□□ 2.01
VEGFA-232ENST00000640653 ARIH1Q9Y4X5 557 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-232ENST00000640653 SRPRBQ9Y5M8 271 aaKnown RBP27.59■■■□□ 2.01
VEGFA-232ENST00000640653 CLDN3O15551 220 aa27.58■■■□□ 2.01
VEGFA-232ENST00000640653 TGM5O43548 720 aa27.58■■■□□ 2.01
VEGFA-232ENST00000640653 RPL17P18621 184 aaKnown RBP27.58■■■□□ 2.01
VEGFA-232ENST00000640653 MARCKSP29966 332 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-232ENST00000640653 CLCNKBP51801 687 aa27.58■■■□□ 2.01
VEGFA-232ENST00000640653 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-232ENST00000640653 HAUS6Q7Z4H7 955 aa27.58■■■□□ 2.01
VEGFA-232ENST00000640653 KCNN1Q92952 543 aa27.58■■■□□ 2.01
VEGFA-232ENST00000640653 ACSF2Q96CM8 615 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-232ENST00000640653 DDX27Q96GQ7 796 aaKnown RBP27.58■■■□□ 2.01
VEGFA-232ENST00000640653 RHOBTB2Q9BYZ6 727 aa27.58■■■□□ 2.01
VEGFA-232ENST00000640653 CCDC39Q9UFE4 941 aa27.58■■■□□ 2.01
VEGFA-232ENST00000640653 FBXO2Q9UK22 296 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-232ENST00000640653 MTMR6Q9Y217 621 aa27.58■■■□□ 2.01
VEGFA-232ENST00000640653 CCDC195A0A1B0GUA6 201 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 TRAPPC3O43617 180 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 STX6O43752 255 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 TBCAO75347 108 aaKnown RBP27.57■■■□□ 2
VEGFA-232ENST00000640653 KCNE1P15382 129 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 DDIT3P35638 169 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 TXLNAP40222 546 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 MATR3P43243 847 aaKnown RBP eCLIP27.57■■■□□ 2
VEGFA-232ENST00000640653 ZNF131P52739 623 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 MCL1Q07820 350 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 PSMD5Q16401 504 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 UPP1Q16831 310 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 FAM173BQ6P4H8 233 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 ZDHHC14Q8IZN3 488 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 EPSTI1Q96J88 318 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 MFSD14AQ96MC6 490 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 GOLGA2P5Q9HBQ8 144 aa27.57■■■□□ 2
VEGFA-232ENST00000640653 CNTN3Q9P232 1028 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms