RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 GM2AP17900 193 aa16.61■□□□□ 0.25
CACNA1A-235ENST00000637004 NR1H3Q13133 447 aa16.61■□□□□ 0.25
CACNA1A-235ENST00000637004 PDCD2Q16342 344 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-235ENST00000637004 GRIK5Q16478 980 aa16.61■□□□□ 0.25
CACNA1A-235ENST00000637004 RIBC1Q8N443 379 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-235ENST00000637004 SLC20A1Q8WUM9 679 aa16.61■□□□□ 0.25
CACNA1A-235ENST00000637004 TRAIPQ9BWF2 469 aa16.61■□□□□ 0.25
CACNA1A-235ENST00000637004 STOML1Q9UBI4 398 aa16.61■□□□□ 0.25
CACNA1A-235ENST00000637004 TBK1Q9UHD2 729 aa16.61■□□□□ 0.25
CACNA1A-235ENST00000637004 A0A1W2PRG0 241 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 FOXO6A8MYZ6 492 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 TRAFD1O14545 582 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 FAM13AO94988 1023 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 RPS6KA3P51812 740 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 PHLDB3Q6NSJ2 640 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 IRGCQ6NXR0 463 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 ETNPPLQ8TBG4 499 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 GRK7Q8WTQ7 553 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 POP1Q99575 1024 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 PAIP2Q9BPZ3 127 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 SYT15Q9BQS2 421 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 PHTF1Q9UMS5 762 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP20Q9Y2K6 914 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 SPDYE5A6NIY4 337 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L15C9J2P7 530 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 RASA4BC9J798 803 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L13C9JLJ4 530 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L11C9JVI0 530 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L18D6R9N7 530 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L22D6RA61 530 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L17D6RBQ6 530 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L19D6RCP7 530 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L20D6RJB6 530 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 RASA4O43374 803 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 HNRNPCL1O60812 293 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 RTN3O95197 1032 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L24Q0WX57 530 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L6PQ6QN14 398 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 SLC51AQ86UW1 340 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 KCTD17Q8N5Z5 321 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 MAIP1Q8WWC4 291 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 NYXQ9GZU5 481 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 NINJ2Q9NZG7 142 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 ANAPC5Q9UJX4 755 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 RABGAP1Q9Y3P9 1069 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 DDX60LQ5H9U9 1706 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 POLRMTO00411 1230 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 FSCN2O14926 492 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 UPP2O95045 317 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 GZMAP12544 262 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 ATF2P15336 505 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 ITGA8P53708 1063 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 MOGSQ13724 837 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 PTK6Q13882 451 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 PRR16Q569H4 304 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 RGS9BPQ6ZS82 235 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 STXBP4Q6ZWJ1 553 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 RPUSD2Q8IZ73 545 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 SLC7A6OSQ96CW6 309 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 UBN1Q9NPG3 1134 aa16.6■□□□□ 0.25
CACNA1A-235ENST00000637004 ZMYM2Q9UBW7 1377 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 NVLO15381 856 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 TRIM49P0CI25 452 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 TRIM49CP0CI26 452 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 DLATP10515 647 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 TM4SF1P30408 202 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 PTGER2P43116 358 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 EIF6P56537 245 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 WDR4P57081 412 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 CETN1Q12798 172 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 SPARCL1Q14515 664 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 ZC3H12AQ5D1E8 599 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 MYCT1Q8N699 235 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 USP17L10C9JJH3 530 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 SP100P23497 879 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 EPHB2P29323 1055 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 DNAJC3Q13217 504 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 AP3B2Q13367 1082 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 TTBK2Q6IQ55 1244 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 ZNF804AQ7Z570 1209 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 BBOF1Q8ND07 529 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 ZNF564Q8TBZ8 553 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 C1orf54Q8WWF1 131 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 FAM20AQ96MK3 541 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 LRCH1Q9Y2L9 728 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 C2CD2Q9Y426 696 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 UBE4BO95155 1302 aa16.59■□□□□ 0.25
CACNA1A-235ENST00000637004 H0Y3Z8 333 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 CLDN3O15551 220 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 SORBS3O60504 671 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 ASMTLO95671 621 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 GSTA2P09210 222 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 IVDP26440 423 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 MARK3P27448 753 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 TUBP50607 506 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 CYP2J2P51589 502 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 ARHGAP4P98171 946 aa16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 RNASELQ05823 741 aaKnown RBP16.58■□□□□ 0.25
CACNA1A-235ENST00000637004 ADCY1Q08828 1119 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms