RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 DDX4Q9NQI0 724 aaKnown RBP15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 PMM2O15305 246 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 RAD21O60216 631 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 ABHD2P08910 425 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 ABL2P42684 1182 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 PPP2R5CQ13362 524 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 ALCAMQ13740 583 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 SLC51AQ86UW1 340 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 ANKLE1Q8NAG6 615 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 DYDC2Q96IM9 177 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 GREB1LQ9C091 1923 aaPredicted RBP15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 RASA4BC9J798 803 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 RASA4O43374 803 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 SGPL1O95470 568 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 ADCY8P40145 1251 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 PEX19P40855 299 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 CENPCQ03188 943 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 RASA3Q14644 834 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 NOP9Q86U38 636 aaKnown RBP15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 CYP4X1Q8N118 509 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 ENDOVQ8N8Q3 282 aaKnown RBP15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 RDH13Q8NBN7 331 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 ERP27Q96DN0 273 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 STRA6Q9BX79 667 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 TMEM206Q9H813 350 aa15.79■□□□□ 0.12
CACNA1A-220ENST00000635988 A0A1W2PRG0 241 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 ATMINO43313 823 aaPredicted RBP15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 PEX11AO75192 247 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 LMNAP02545 664 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 ATP6V1C1P21283 382 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 FOXN2P32314 431 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 KCNQ4P56696 695 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 SNX1Q13596 522 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 SYDE2Q5VT97 1194 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 C12orf56Q8IXR9 622 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 CCDC89Q8N998 374 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 CNBD1Q8NA66 436 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 FBXO41Q8TF61 875 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 TBK1Q9UHD2 729 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 HNRNPCL1O60812 293 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 TPBGLP0DKB5 382 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 EEF2P13639 858 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 CDC25CP30307 473 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 RAD23BP54727 409 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 MFAP3P55082 362 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 SPARCL1Q14515 664 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 TSNAXIP1Q2TAA8 658 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 KCNV2Q8TDN2 545 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 FAM167BQ9BTA0 163 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 DCLK3Q9C098 648 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 ARHGEF10LQ9HCE6 1279 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 EURLQ9NYK6 297 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 SENP1Q9P0U3 644 aa15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 CHORDC1Q9UHD1 332 aaPredicted RBP15.78■□□□□ 0.12
CACNA1A-220ENST00000635988 IGLV3-22A0A075B6J6 115 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 AHCYL1O43865 530 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 PSMD10O75832 226 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 ASMTLO95671 621 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 FESP07332 822 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 LINGO3P0C6S8 592 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 PCK1P35558 622 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 PRELPP51888 382 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 FMO1Q01740 532 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 PPP3CAQ08209 521 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 FAM47EQ6ZV65 393 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 BTBD6Q96KE9 485 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 FAM81BQ96LP2 452 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 CHST7Q9NS84 486 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 PHTF1Q9UMS5 762 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 ZNF335Q9H4Z2 1342 aaPredicted RBP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 LRRD1A4D1F6 860 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 PIK3CDO00329 1044 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 TRAFD1O14545 582 aaPredicted RBP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 HGSO14964 777 aaPredicted RBP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 PRPF4O43172 522 aaKnown RBP eCLIP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 MAPTP10636 758 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 NEFHP12036 1026 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 ATP4AP20648 1035 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 SLC1A1P43005 524 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 WDR4P57081 412 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 DLG4P78352 724 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 CDR2Q01850 454 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 LBRQ14739 615 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 USH1GQ495M9 461 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 FAM13CQ8NE31 585 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 CYP2W1Q8TAV3 490 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 MAML1Q92585 1016 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 KIFAP3Q92845 792 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 CFAP57Q96MR6 1250 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 NUDCD1Q96RS6 583 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 NKX1-2Q9UD57 310 aaPredicted RBP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 SMG5Q9UPR3 1016 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 CHKBQ9Y259 395 aa15.77■□□□□ 0.12
CACNA1A-220ENST00000635988 GCLMP48507 274 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 MXI1P50539 228 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 GTF2IP78347 998 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 TRAF1Q13077 416 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms