RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 LARP4BQ92615 738 aaKnown RBP20.02■□□□□ 0.8
CLN6-210ENST00000635747 LRFN3Q9BTN0 628 aa20.02■□□□□ 0.8
CLN6-210ENST00000635747 PARVGQ9HBI0 331 aa20.02■□□□□ 0.8
CLN6-210ENST00000635747 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.8
CLN6-210ENST00000635747 BLOC1S4Q9NUP1 217 aa20.02■□□□□ 0.8
CLN6-210ENST00000635747 SLC38A7Q9NVC3 462 aa20.02■□□□□ 0.8
CLN6-210ENST00000635747 NPHP3-ACAD11A0A0J9YXS1 232 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 F8W810 466 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 GLUD1P00367 558 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 COL9A1P20849 921 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 MARCKSP29966 332 aaPredicted RBP20.01■□□□□ 0.79
CLN6-210ENST00000635747 NCKAP1LP55160 1127 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 MCM6Q14566 821 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 XKR4Q5GH76 650 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 DCLRE1AQ6PJP8 1040 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 CYP26C1Q6V0L0 522 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 ZBTB33Q86T24 672 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 MYCT1Q8N699 235 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 HDAC7Q8WUI4 952 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 PPP1R10Q96QC0 940 aaKnown RBP20.01■□□□□ 0.79
CLN6-210ENST00000635747 REEP2Q9BRK0 252 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 STK17AQ9UEE5 414 aa20.01■□□□□ 0.79
CLN6-210ENST00000635747 FBXO2Q9UK22 296 aaPredicted RBP20.01■□□□□ 0.79
CLN6-210ENST00000635747 SMIM28A0A1B0GU29 152 aa20■□□□□ 0.79
CLN6-210ENST00000635747 PRR33A8MZF0 331 aa20■□□□□ 0.79
CLN6-210ENST00000635747 TMEM189-UBE2V1I3L0A0 370 aa20■□□□□ 0.79
CLN6-210ENST00000635747 CLDN3O15551 220 aa20■□□□□ 0.79
CLN6-210ENST00000635747 ZNF131P52739 623 aa20■□□□□ 0.79
CLN6-210ENST00000635747 NOLC1Q14978 699 aaKnown RBP eCLIP20■□□□□ 0.79
CLN6-210ENST00000635747 ALKAL1Q6UXT8 129 aa20■□□□□ 0.79
CLN6-210ENST00000635747 C15orf39Q6ZRI6 1047 aa20■□□□□ 0.79
CLN6-210ENST00000635747 HAUS6Q7Z4H7 955 aa20■□□□□ 0.79
CLN6-210ENST00000635747 C12orf76Q8N812 135 aaPredicted RBP20■□□□□ 0.79
CLN6-210ENST00000635747 CMASQ8NFW8 434 aaPredicted RBP20■□□□□ 0.79
CLN6-210ENST00000635747 RIN2Q8WYP3 895 aaPredicted RBP20■□□□□ 0.79
CLN6-210ENST00000635747 RABGGTAQ92696 567 aa20■□□□□ 0.79
CLN6-210ENST00000635747 DDX27Q96GQ7 796 aaKnown RBP20■□□□□ 0.79
CLN6-210ENST00000635747 EPSTI1Q96J88 318 aa20■□□□□ 0.79
CLN6-210ENST00000635747 PAAF1Q9BRP4 392 aa20■□□□□ 0.79
CLN6-210ENST00000635747 TTPALQ9BTX7 342 aa20■□□□□ 0.79
CLN6-210ENST00000635747 PLEKHA4Q9H4M7 779 aa20■□□□□ 0.79
CLN6-210ENST00000635747 MUTYHQ9UIF7 546 aa20■□□□□ 0.79
CLN6-210ENST00000635747 ABLIM1O14639 778 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 TRAPPC3O43617 180 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 TBCAO75347 108 aaKnown RBP19.99■□□□□ 0.79
CLN6-210ENST00000635747 KIF4AO95239 1232 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 HSP90AA1P07900 732 aaKnown RBP19.99■□□□□ 0.79
CLN6-210ENST00000635747 OSTNP61366 133 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 CACNB1Q02641 598 aaPredicted RBP19.99■□□□□ 0.79
CLN6-210ENST00000635747 CEBPZQ03701 1054 aaKnown RBP19.99■□□□□ 0.79
CLN6-210ENST00000635747 MCL1Q07820 350 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 SLC39A14Q15043 492 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 KYAT1Q16773 422 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 FAM171A1Q5VUB5 890 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 FAM173BQ6P4H8 233 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 TMC5Q6UXY8 1006 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 GPR149Q86SP6 731 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 CEP120Q8N960 986 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 KRI1Q8N9T8 703 aaKnown RBP19.99■□□□□ 0.79
CLN6-210ENST00000635747 BICD1Q96G01 975 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 POMKQ9H5K3 350 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 C11orf16Q9NQ32 467 aa19.99■□□□□ 0.79
CLN6-210ENST00000635747 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.99■□□□□ 0.79
CLN6-210ENST00000635747 TRAK2O60296 914 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 B3GAT3O94766 335 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 KCNE1P15382 129 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 MATR3P43243 847 aaKnown RBP eCLIP19.98■□□□□ 0.79
CLN6-210ENST00000635747 UPP1Q16831 310 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 GLRA4Q5JXX5 417 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 SPECC1Q5M775 1068 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 RRAGBQ5VZM2 374 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 PLCD3Q8N3E9 789 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 LRRC15Q8TF66 581 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 HASPINQ8TF76 798 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 PIK3R5Q8WYR1 880 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 EDAQ92838 391 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 ZBTB45Q96K62 511 aaPredicted RBP19.98■□□□□ 0.79
CLN6-210ENST00000635747 SNX27Q96L92 541 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 USP28Q96RU2 1077 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 RHOBTB2Q9BYZ6 727 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 CXCL16Q9H2A7 254 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 MAN1C1Q9NR34 630 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 TSHZ2Q9NRE2 1034 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 CNTN3Q9P232 1028 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 ANKFY1Q9P2R3 1169 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 CACNG4Q9UBN1 327 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 USTQ9Y2C2 406 aa19.98■□□□□ 0.79
CLN6-210ENST00000635747 FAM86C2PA6NEL3 165 aa19.97■□□□□ 0.79
CLN6-210ENST00000635747 K7ENM7 598 aa19.97■□□□□ 0.79
CLN6-210ENST00000635747 HARSP12081 509 aaKnown RBP19.97■□□□□ 0.79
CLN6-210ENST00000635747 LIG4P49917 911 aa19.97■□□□□ 0.79
CLN6-210ENST00000635747 CLCNKBP51801 687 aa19.97■□□□□ 0.79
CLN6-210ENST00000635747 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.97■□□□□ 0.79
CLN6-210ENST00000635747 CCDC73Q6ZRK6 1079 aa19.97■□□□□ 0.79
CLN6-210ENST00000635747 SV2BQ7L1I2 683 aa19.97■□□□□ 0.79
CLN6-210ENST00000635747 CEP57Q86XR8 500 aa19.97■□□□□ 0.79
CLN6-210ENST00000635747 B3GALT6Q96L58 329 aa19.97■□□□□ 0.79
CLN6-210ENST00000635747 ZNF396Q96N95 335 aaPredicted RBP19.97■□□□□ 0.79
CLN6-210ENST00000635747 ZHX3Q9H4I2 956 aa19.97■□□□□ 0.79
CLN6-210ENST00000635747 PLEKHA5Q9HAU0 1116 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms