RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 TRIML1Q8N9V2 468 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 TMEM206Q9H813 350 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 EXOC7Q9UPT5 735 aa20.37■□□□□ 0.85
PNKP-224ENST00000631020 UBE4BO95155 1302 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 PPP1R3GB7ZBB8 358 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 N4BP3O15049 544 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 ADSSP30520 456 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 LTBRP36941 435 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 COBLL1Q53SF7 1204 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 SLC27A1Q6PCB7 646 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 LRRC55Q6ZSA7 311 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 THNSL1Q8IYQ7 743 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 SYAP1Q96A49 352 aaPredicted RBP20.36■□□□□ 0.85
PNKP-224ENST00000631020 CCDC51Q96ER9 411 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 KCTD10Q9H3F6 313 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 TLR9Q9NR96 1032 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 STYXL1Q9Y6J8 313 aa20.36■□□□□ 0.85
PNKP-224ENST00000631020 NPTXRO95502 500 aa20.35■□□□□ 0.85
PNKP-224ENST00000631020 MPZL3Q6UWV2 235 aa20.35■□□□□ 0.85
PNKP-224ENST00000631020 ZBTB33Q86T24 672 aa20.35■□□□□ 0.85
PNKP-224ENST00000631020 ADSSL1Q8N142 457 aa20.35■□□□□ 0.85
PNKP-224ENST00000631020 SMG8Q8ND04 991 aaKnown RBP20.35■□□□□ 0.85
PNKP-224ENST00000631020 ZNF558Q96NG5 402 aa20.35■□□□□ 0.85
PNKP-224ENST00000631020 TCHPQ9BT92 498 aa20.35■□□□□ 0.85
PNKP-224ENST00000631020 GTPBP4Q9BZE4 634 aaKnown RBP20.35■□□□□ 0.85
PNKP-224ENST00000631020 GBP3Q9H0R5 595 aa20.35■□□□□ 0.85
PNKP-224ENST00000631020 CDT1Q9H211 546 aa20.35■□□□□ 0.85
PNKP-224ENST00000631020 FAM105AQ9NUU6 356 aa20.35■□□□□ 0.85
PNKP-224ENST00000631020 PCDHB2Q9Y5E7 798 aa20.35■□□□□ 0.85
PNKP-224ENST00000631020 H3BQ06 376 aaPredicted RBP20.34■□□□□ 0.85
PNKP-224ENST00000631020 MCL1Q07820 350 aa20.34■□□□□ 0.85
PNKP-224ENST00000631020 ADAM15Q13444 863 aa20.34■□□□□ 0.85
PNKP-224ENST00000631020 KCNT2Q6UVM3 1135 aa20.34■□□□□ 0.85
PNKP-224ENST00000631020 EFHBQ8N7U6 833 aa20.34■□□□□ 0.85
PNKP-224ENST00000631020 RNF169Q8NCN4 708 aa20.34■□□□□ 0.85
PNKP-224ENST00000631020 ANKFY1Q9P2R3 1169 aa20.34■□□□□ 0.85
PNKP-224ENST00000631020 HCSTQ9UBK5 93 aa20.34■□□□□ 0.85
PNKP-224ENST00000631020 PUF60Q9UHX1 559 aaKnown RBP20.34■□□□□ 0.85
PNKP-224ENST00000631020 HES2Q9Y543 173 aa20.34■□□□□ 0.85
PNKP-224ENST00000631020 A0A0B4J269 797 aa20.33■□□□□ 0.85
PNKP-224ENST00000631020 CLDN3O15551 220 aa20.33■□□□□ 0.85
PNKP-224ENST00000631020 IRS1P35568 1242 aa20.33■□□□□ 0.85
PNKP-224ENST00000631020 ZNF568Q3ZCX4 644 aa20.33■□□□□ 0.85
PNKP-224ENST00000631020 HELQQ8TDG4 1101 aa20.33■□□□□ 0.85
PNKP-224ENST00000631020 CDCA3Q99618 268 aaPredicted RBP20.33■□□□□ 0.85
PNKP-224ENST00000631020 RNF39Q9H2S5 420 aa20.33■□□□□ 0.85
PNKP-224ENST00000631020 PRKAG3Q9UGI9 489 aa20.33■□□□□ 0.85
PNKP-224ENST00000631020 IPPQ9Y573 584 aa20.33■□□□□ 0.85
PNKP-224ENST00000631020 MEIS3P2A8K0S8 358 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 FSCN2O14926 492 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 NLRP12P59046 1061 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 DPCR1Q3MIW9 517 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 SLFN12LQ6IEE8 588 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 EP400NLQ6ZTU2 488 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 MRPL10Q7Z7H8 261 aaKnown RBP20.32■□□□□ 0.84
PNKP-224ENST00000631020 CEP120Q8N960 986 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 ZSWIM2Q8NEG5 633 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 PGBD4Q96DM1 585 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 ADPGKQ9BRR6 497 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 CBWD1Q9BRT8 395 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 NXF3Q9H4D5 531 aaKnown RBP20.32■□□□□ 0.84
PNKP-224ENST00000631020 AGPAT3Q9NRZ7 376 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 PDXKO00764 312 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 CLIC2O15247 247 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 FAM189A1O60320 539 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 KIF20AO95235 890 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 MCF2P10911 925 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 HARSP12081 509 aaKnown RBP20.32■□□□□ 0.84
PNKP-224ENST00000631020 IL9P15248 144 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 PMS1P54277 932 aaKnown RBP20.32■□□□□ 0.84
PNKP-224ENST00000631020 KRT17Q04695 432 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 NOLC1Q14978 699 aaKnown RBP eCLIP20.32■□□□□ 0.84
PNKP-224ENST00000631020 ZCWPW2Q504Y3 356 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 SEZ6Q53EL9 994 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 CENPPQ6IPU0 288 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 GLB1LQ6UWU2 654 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 ADGRD2Q7Z7M1 963 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 POMGNT1Q8WZA1 660 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 NGRNQ9NPE2 291 aaKnown RBP20.32■□□□□ 0.84
PNKP-224ENST00000631020 SPG21Q9NZD8 308 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 TRAF3IP3Q9Y228 551 aa20.32■□□□□ 0.84
PNKP-224ENST00000631020 TBX10O75333 385 aa20.31■□□□□ 0.84
PNKP-224ENST00000631020 GTF2F1P35269 517 aaKnown RBP eCLIP20.31■□□□□ 0.847e-8■■■□□ 17.9
PNKP-224ENST00000631020 MATR3P43243 847 aaKnown RBP eCLIP20.31■□□□□ 0.84
PNKP-224ENST00000631020 DLX2Q07687 328 aaPredicted RBP20.31■□□□□ 0.84
PNKP-224ENST00000631020 DCAF4L1Q3SXM0 396 aa20.31■□□□□ 0.84
PNKP-224ENST00000631020 ZBTB41Q5SVQ8 909 aa20.31■□□□□ 0.84
PNKP-224ENST00000631020 MLKLQ8NB16 471 aa20.31■□□□□ 0.84
PNKP-224ENST00000631020 MICAL1Q8TDZ2 1067 aa20.31■□□□□ 0.84
PNKP-224ENST00000631020 LPPQ93052 612 aa20.31■□□□□ 0.84
PNKP-224ENST00000631020 MSLNLQ96KJ4 702 aa20.31■□□□□ 0.84
PNKP-224ENST00000631020 TRIM6Q9C030 488 aaPredicted RBP20.31■□□□□ 0.84
PNKP-224ENST00000631020 PCIF1Q9H4Z3 704 aa20.31■□□□□ 0.84
PNKP-224ENST00000631020 IGFLR1Q9H665 355 aa20.31■□□□□ 0.84
PNKP-224ENST00000631020 TLE6Q9H808 572 aa20.31■□□□□ 0.84
PNKP-224ENST00000631020 GARTP22102 1010 aa20.3■□□□□ 0.84
PNKP-224ENST00000631020 NRIP1P48552 1158 aa20.3■□□□□ 0.84
PNKP-224ENST00000631020 ALDH7A1P49419 539 aaKnown RBP20.3■□□□□ 0.84
PNKP-224ENST00000631020 ERVFC1P60507 584 aa20.3■□□□□ 0.84
PNKP-224ENST00000631020 OSTNP61366 133 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms