RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 HTR3BO95264 441 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 YEATS4O95619 227 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CHGBP05060 677 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC159P0C7I6 412 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 U2AF1L5P0DN76 240 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 GLI4P10075 376 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 VAV1P15498 845 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 KCNA2P16389 499 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 NAT1P18440 290 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 KRT4P19013 534 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CYP11B2P19099 503 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 POLR2EP19388 210 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 EIF2S2P20042 333 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 LMNB1P20700 586 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 EIF4BP23588 611 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 SMARCA1P28370 1054 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 STIP1P31948 543 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 LSP1P33241 339 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 COPB2P35606 906 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 MDH1P40925 334 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 EPS15P42566 896 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ACADVLP49748 655 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 TMED10P49755 219 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 USP14P54578 494 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 TPD52P55327 224 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ZC3H6P61129 1189 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 RPS26P62854 115 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 KRT83P78385 493 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 FANCCQ00597 558 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 U2AF1Q01081 240 aaKnown RBP eCLIP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 MYL5Q02045 173 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ITIH3Q06033 890 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 EXOSC9Q06265 439 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CACNB2Q08289 660 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC15Q0P6D6 951 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 MAP3K12Q12852 859 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 AIMP1Q12904 312 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 EIF2B5Q13144 721 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 PABPC4Q13310 644 aaKnown RBP eCLIP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 XRCC4Q13426 336 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 BIRC3Q13489 604 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 SNX1Q13596 522 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CYLC2Q14093 348 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 TRIM29Q14134 588 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 SAFB2Q14151 953 aaKnown RBP eCLIP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 SPIDRQ14159 915 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 KRT32Q14532 448 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ITIH4Q14624 930 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 KPNB1Q14974 876 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC85BQ15834 202 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CNGA3Q16281 694 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 PTGISQ16647 500 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 NDUFA5Q16718 116 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 SGSM1Q2NKQ1 1148 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC144BQ3MJ40 725 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 NRN1LQ496H8 165 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 PLEKHO1Q53GL0 409 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 LACTB2Q53H82 288 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ANKRD20A8PQ5CZ79 823 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 FAM26FQ5R3K3 315 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 PRR31Q5SQ13 230 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 AKNAD1Q5T1N1 836 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 THEMIS2Q5TEJ8 643 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 C6orf163Q5TEZ5 329 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CDCP2Q5VXM1 449 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 NAA35Q5VZE5 725 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 FAAH2Q6GMR7 532 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 HIBCHQ6NVY1 386 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 TMEM154Q6P9G4 183 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 BORAQ6PGQ7 559 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 KDM7AQ6ZMT4 941 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 RBM43Q6ZSC3 357 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 NCCRP1Q6ZVX7 275 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 NLRP9Q7RTR0 991 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 MIER3Q7Z3K6 550 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 TMEM110Q86TL2 294 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ARHGEF25Q86VW2 580 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ANKRD13BQ86YJ7 626 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 TMTC1Q8IUR5 882 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CROCCP3Q8IVE0 287 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 WDR75Q8IWA0 830 aaKnown RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC144CPQ8IYA2 1237 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ANKRD13AQ8IZ07 590 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ST13P4Q8IZP2 240 aaPredicted RBP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 FUKQ8N0W3 1084 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CNTROBQ8N137 903 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 LRRC43Q8N309 656 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 ARL10Q8N8L6 244 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 FSIP1Q8NA03 581 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 SMYD1Q8NB12 490 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 PHC3Q8NDX5 983 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 STKLD1Q8NE28 680 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CFAP61Q8NHU2 1237 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 KLHDC4Q8TBB5 520 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 PIP4K2CQ8TBX8 421 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 CCDC110Q8TBZ0 833 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 KCNG4Q8TDN1 519 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 WDR60Q8WVS4 1066 aa2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.24□□□□□ -2.05
SPTAN1-216ENST00000629047 MRPS27Q92552 414 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms