RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 WEE2P0C1S8 567 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 MAPTP10636 758 aaKnown RBP18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 PLCG1P19174 1290 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 SCP2P22307 547 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 SP100P23497 879 aaPredicted RBP18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 GLRA4Q5JXX5 417 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 KANK3Q6NY19 840 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 C15orf39Q6ZRI6 1047 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 ZBTB33Q86T24 672 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 CEP120Q8N960 986 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 CMASQ8NFW8 434 aaPredicted RBP18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 HDAC7Q8WUI4 952 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 RAD54LQ92698 747 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 REEP2Q9BRK0 252 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 TTPALQ9BTX7 342 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 CCSER1Q9C0I3 900 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 BLOC1S4Q9NUP1 217 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 SLC38A7Q9NVC3 462 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 RAPGEFL1Q9UHV5 662 aa18.84■□□□□ 0.61
SPTAN1-214ENST00000628614 C2CD4DB7Z1M9 353 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 TMEM189-UBE2V1I3L0A0 370 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 ABLIM1O14639 778 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 FAM13AO94988 1023 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 NCKAP1LP55160 1127 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 OSTNP61366 133 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 CACNB1Q02641 598 aaPredicted RBP18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 DHX8Q14562 1220 aaKnown RBP18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 NOLC1Q14978 699 aaKnown RBP eCLIP18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 PTPAQ15257 358 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 XKR4Q5GH76 650 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 FAM171A1Q5VUB5 890 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 PDXDC1Q6P996 788 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 ZPBP2Q6X784 338 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 TDRD5Q8NAT2 981 aaKnown RBP18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 LARP4BQ92615 738 aaKnown RBP18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 KCNN1Q92952 543 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 ACAP3Q96P50 834 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 PLEKHA4Q9H4M7 779 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 ANKFY1Q9P2R3 1169 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 USTQ9Y2C2 406 aa18.83■□□□□ 0.6
SPTAN1-214ENST00000628614 SMIM28A0A1B0GU29 152 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 KRT18P05783 430 aaKnown RBP18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 HARSP12081 509 aaKnown RBP18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 MARCKSP29966 332 aaPredicted RBP18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 ZXDAP98168 799 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 MCM6Q14566 821 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 RTP2Q5QGT7 225 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 DCLRE1AQ6PJP8 1040 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 ALKAL1Q6UXT8 129 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 CYP26C1Q6V0L0 522 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 CCDC149Q6ZUS6 474 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 LRRC15Q8TF66 581 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 PIK3R5Q8WYR1 880 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 BICD1Q96G01 975 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 SNX27Q96L92 541 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 RHOBTB2Q9BYZ6 727 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 ZSCAN16Q9H4T2 348 aaPredicted RBP18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 PARVGQ9HBI0 331 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 FOXD4L1Q9NU39 408 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 FBXO2Q9UK22 296 aaPredicted RBP18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 MTMR6Q9Y217 621 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 SRPRBQ9Y5M8 271 aaKnown RBP18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 TRIOO75962 3097 aa18.82■□□□□ 0.6
SPTAN1-214ENST00000628614 CLDN3O15551 220 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 TGM5O43548 720 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 STX6O43752 255 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 TBCAO75347 108 aaKnown RBP18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 B3GAT3O94766 335 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 TXLNAP40222 546 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 CLCNKBP51801 687 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 ZNF131P52739 623 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 PSMD5Q16401 504 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 PTPN21Q16825 1174 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 UPP1Q16831 310 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 PRSS55Q6UWB4 352 aaPredicted RBP18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 HAUS6Q7Z4H7 955 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 CEP57Q86XR8 500 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 PALB2Q86YC2 1186 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 PLCD3Q8N3E9 789 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 MYCT1Q8N699 235 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 SNX21Q969T3 373 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 DDX27Q96GQ7 796 aaKnown RBP18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 ZBTB45Q96K62 511 aaPredicted RBP18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 CNTN3Q9P232 1028 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 CCDC39Q9UFE4 941 aa18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 ARIH1Q9Y4X5 557 aaPredicted RBP18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 MORC2Q9Y6X9 1032 aaPredicted RBP18.81■□□□□ 0.6
SPTAN1-214ENST00000628614 K7ENM7 598 aa18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 TRAPPC3O43617 180 aa18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 KCNE1P15382 129 aa18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 RPL17P18621 184 aaKnown RBP18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 ABCD1P33897 745 aa18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 DDIT3P35638 169 aa18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 MATR3P43243 847 aaKnown RBP eCLIP18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 MCL1Q07820 350 aa18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 FAM173BQ6P4H8 233 aa18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 TRIM67Q6ZTA4 783 aa18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 GLYCTKQ8IVS8 523 aa18.8■□□□□ 0.6
SPTAN1-214ENST00000628614 ZDHHC14Q8IZN3 488 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms