RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 SPATA31D3P0C874 917 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 ALADP13716 330 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 SMTNP53814 917 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 NCKAP1LP55160 1127 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 ITIH3Q06033 890 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 SOX4Q06945 474 aaPredicted RBP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 STRN3Q13033 797 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 USP41Q3LFD5 358 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 HERC4Q5GLZ8 1057 aaPredicted RBP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 RTP2Q5QGT7 225 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 CES5AQ6NT32 575 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 PRSS55Q6UWB4 352 aaPredicted RBP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 MPZL3Q6UWV2 235 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 ALKAL1Q6UXT8 129 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 SPATA31D4Q6ZUB0 917 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 APBB1IPQ7Z5R6 666 aaPredicted RBP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 PPFIBP1Q86W92 1011 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 GLYCTKQ8IVS8 523 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 RIN2Q8WYP3 895 aaPredicted RBP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 LARP4BQ92615 738 aaKnown RBP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 ZMAT2Q96NC0 199 aaKnown RBP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 TCHPQ9BT92 498 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 CCDC94Q9BW85 323 aaPredicted RBP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 CCSER1Q9C0I3 900 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 HAPLN2Q9GZV7 340 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 RXFP1Q9HBX9 757 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 MAN1C1Q9NR34 630 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 LARSQ9P2J5 1176 aaKnown RBP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 ODF2LQ9ULJ1 636 aa11.5□□□□□ -0.57
TMCO1-209ENST00000628579 SRPRBQ9Y5M8 271 aaKnown RBP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 SF3B1O75533 1304 aaKnown RBP eCLIP11.5□□□□□ -0.57
TMCO1-209ENST00000628579 VWA8A3KMH1 1905 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 MYH15Q9Y2K3 1946 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 C2orf16Q68DN1 1984 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 TOM1L1O75674 476 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 BRD1O95696 1058 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 MCF2P10911 925 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 CLCNKBP51801 687 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 ZNF131P52739 623 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 NOLC1Q14978 699 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMCO1-209ENST00000628579 XKR4Q5GH76 650 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 FAM171A1Q5VUB5 890 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 FOXD4L5Q5VV16 416 aaPredicted RBP11.49□□□□□ -0.57
TMCO1-209ENST00000628579 CD300LGQ6UXG3 332 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 HAUS6Q7Z4H7 955 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 CEP57Q86XR8 500 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 PALB2Q86YC2 1186 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 MYCT1Q8N699 235 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 C3orf58Q8NDZ4 430 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 FOXD4L4Q8WXT5 416 aaPredicted RBP11.49□□□□□ -0.57
TMCO1-209ENST00000628579 SNX27Q96L92 541 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 ZHX3Q9H4I2 956 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 SFXN1Q9H9B4 322 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 SSX2IPQ9Y2D8 614 aa11.49□□□□□ -0.57
TMCO1-209ENST00000628579 A0A087X0B3 334 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 C2CD4DB7Z1M9 353 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 K7ENM7 598 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 TGM5O43548 720 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 RFPL2O75678 378 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 B3GAT3O94766 335 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 FAM13AO94988 1023 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 GLUD1P00367 558 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 KRT18P05783 430 aaKnown RBP11.48□□□□□ -0.57
TMCO1-209ENST00000628579 DDIT3P35638 169 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 MTHFRP42898 656 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 YARSP54577 528 aaKnown RBP11.48□□□□□ -0.57
TMCO1-209ENST00000628579 SLC39A14Q15043 492 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 UPP1Q16831 310 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 ZPBP2Q6X784 338 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 HSCBQ8IWL3 235 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 TMEM130Q8N3G9 435 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 C18orf25Q96B23 403 aaPredicted RBP11.48□□□□□ -0.57
TMCO1-209ENST00000628579 BICD1Q96G01 975 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 RIPOR3Q96MK2 946 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 NECTIN4Q96NY8 510 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 ACAP3Q96P50 834 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 FIZ1Q96SL8 496 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 TTPALQ9BTX7 342 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 ZSCAN16Q9H4T2 348 aaPredicted RBP11.48□□□□□ -0.57
TMCO1-209ENST00000628579 PARVGQ9HBI0 331 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 TOPORSQ9NS56 1045 aaPredicted RBP11.48□□□□□ -0.57
TMCO1-209ENST00000628579 KCNG1Q9UIX4 513 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 TBX20Q9UMR3 447 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 DENND4AQ7Z401 1863 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 CITO14578 2027 aa11.48□□□□□ -0.57
TMCO1-209ENST00000628579 TECTAO75443 2155 aa11.47□□□□□ -0.57
TMCO1-209ENST00000628579 TMEM189-UBE2V1I3L0A0 370 aa11.47□□□□□ -0.57
TMCO1-209ENST00000628579 I3L4J1 428 aa11.47□□□□□ -0.57
TMCO1-209ENST00000628579 CLDN3O15551 220 aa11.47□□□□□ -0.57
TMCO1-209ENST00000628579 ADAM12O43184 909 aa11.47□□□□□ -0.57
TMCO1-209ENST00000628579 TRAK2O60296 914 aa11.47□□□□□ -0.57
TMCO1-209ENST00000628579 TBCAO75347 108 aaKnown RBP11.47□□□□□ -0.57
TMCO1-209ENST00000628579 CXCL8P10145 99 aa11.47□□□□□ -0.57
TMCO1-209ENST00000628579 NMT1P30419 496 aaKnown RBP11.47□□□□□ -0.57
TMCO1-209ENST00000628579 TNFSF9P41273 254 aa11.47□□□□□ -0.57
TMCO1-209ENST00000628579 MATR3P43243 847 aaKnown RBP eCLIP11.47□□□□□ -0.57
TMCO1-209ENST00000628579 BRCC3P46736 316 aa11.47□□□□□ -0.57
TMCO1-209ENST00000628579 NASPP49321 788 aaPredicted RBP11.47□□□□□ -0.57
TMCO1-209ENST00000628579 MCL1Q07820 350 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms