RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SPAG7O75391 227 aa13.67□□□□□ -0.22
MSH6-215ENST00000622629 HLA-DRAP01903 254 aa13.67□□□□□ -0.22
MSH6-215ENST00000622629 MT-ND3P03897 115 aa13.67□□□□□ -0.22
MSH6-215ENST00000622629 PRKCEQ02156 737 aa13.67□□□□□ -0.22
MSH6-215ENST00000622629 ZNF568Q3ZCX4 644 aa13.67□□□□□ -0.22
MSH6-215ENST00000622629 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
MSH6-215ENST00000622629 KDM7AQ6ZMT4 941 aa13.67□□□□□ -0.22
MSH6-215ENST00000622629 SLC47A2Q86VL8 602 aa13.67□□□□□ -0.22
MSH6-215ENST00000622629 SLC13A5Q86YT5 568 aaPredicted RBP13.67□□□□□ -0.22
MSH6-215ENST00000622629 ATL2Q8NHH9 583 aa13.67□□□□□ -0.22
MSH6-215ENST00000622629 TARS2Q9BW92 718 aaKnown RBP13.67□□□□□ -0.22
MSH6-215ENST00000622629 SPEF2Q9C093 1822 aa13.67□□□□□ -0.22
MSH6-215ENST00000622629 SCN11AQ9UI33 1791 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 UBE4BO95155 1302 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 TCP11X1B4DZS4 312 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 STK10O94804 968 aaKnown RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 ICAM1P05362 532 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 ABCD1P33897 745 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 GABPAQ06546 454 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 RHPN2Q8IUC4 686 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 KCTD17Q8N5Z5 321 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 PSPC1Q8WXF1 523 aaKnown RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 DCPSQ96C86 337 aaKnown RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 SEC16BQ96JE7 1060 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 IDI2Q9BXS1 227 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 TTYH3Q9C0H2 523 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 GANQ9H2C0 597 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 KCTD10Q9H3F6 313 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 ACP6Q9NPH0 428 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 SEPT10Q9P0V9 454 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 COL1A1P02452 1464 aaPredicted RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 GTPBP10A4D1E9 387 aaKnown RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 CCDC14Q49A88 953 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 SAMD7Q7Z3H4 446 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 ZBED8Q8IZ13 594 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 CCHCR1Q8TD31 782 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 KAT5Q92993 513 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 ARHGEF26Q96DR7 871 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 USP20Q9Y2K6 914 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 LTBP4Q8N2S1 1624 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 SPATA31C1P0DKV0 1188 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 RARRES1P49788 294 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 PPP6R3Q5H9R7 873 aaPredicted RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 STYK1Q6J9G0 422 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 RAB3IPQ96QF0 476 aaPredicted RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 PABPC3Q9H361 631 aaKnown RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 DISP2A7MBM2 1401 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 C5P01031 1676 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 CAND2O75155 1236 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 NPTX2P47972 431 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 NBPF9Q3BBW0 867 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 XKR3Q5GH77 459 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 AGBL2Q5U5Z8 902 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 ZNF662Q6ZS27 426 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 NT5DC3Q86UY8 548 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 RNF149Q8NC42 400 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 TGS1Q96RS0 853 aaKnown RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 MOV10L1Q9BXT6 1211 aaKnown RBP13.66□□□□□ -0.22
MSH6-215ENST00000622629 GTF3C4Q9UKN8 822 aa13.66□□□□□ -0.22
MSH6-215ENST00000622629 LRP6O75581 1613 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 CHUKO15111 745 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 MED7O43513 233 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 CIB2O75838 187 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 TBXAS1P24557 533 aaPredicted RBP13.65□□□□□ -0.22
MSH6-215ENST00000622629 COILP38432 576 aaPredicted RBP13.65□□□□□ -0.22
MSH6-215ENST00000622629 ARSEP51690 589 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 CRY2Q49AN0 593 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 PPP1R2P3Q6NXS1 205 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.65□□□□□ -0.22
MSH6-215ENST00000622629 TMBIM4Q9HC24 238 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 P4HA2O15460 535 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 AGTP01019 485 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 CYP11B1P15538 503 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 PSMC1P62191 440 aaKnown RBP13.65□□□□□ -0.22
MSH6-215ENST00000622629 PDIA2Q13087 525 aaKnown RBP13.65□□□□□ -0.22
MSH6-215ENST00000622629 TRIM50Q86XT4 487 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 SCYL3Q8IZE3 742 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 NME8Q8N427 588 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 RBBP8NLQ8NC74 664 aaPredicted RBP13.65□□□□□ -0.22
MSH6-215ENST00000622629 MKL1Q969V6 931 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 TEX13BQ9BXU2 312 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 OSBPL8Q9BZF1 889 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 TAS2R14Q9NYV8 317 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 PRPSAP2O60256 369 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 NCOA4Q13772 614 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 SPARCL1Q14515 664 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 SYCP2LQ5T4T6 812 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 HGSNATQ68CP4 663 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 C1orf186Q6ZWK4 172 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 ARHGEF19Q8IW93 802 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 MICALL2Q8IY33 904 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 SLC16A10Q8TF71 515 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 HEY1Q9Y5J3 304 aa13.65□□□□□ -0.22
MSH6-215ENST00000622629 ASTN1O14525 1302 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 CALB1P05937 261 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 CAV1Q03135 178 aa13.64□□□□□ -0.23
MSH6-215ENST00000622629 CDR2LQ86X02 465 aaPredicted RBP13.64□□□□□ -0.23
MSH6-215ENST00000622629 ETNPPLQ8TBG4 499 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms