RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 DUSP10Q9Y6W6 482 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 PJA2O43164 708 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 ZC3H11AO75152 810 aaKnown RBP eCLIP23.16■■□□□ 1.3
SPAST-204ENST00000621856 C6orf222P0C671 652 aaPredicted RBP23.16■■□□□ 1.3
SPAST-204ENST00000621856 CYP2C9P11712 490 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 USP8P40818 1118 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 SURF1Q15526 300 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 AMHR2Q16671 573 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 WDR44Q5JSH3 913 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 SRGAP1Q7Z6B7 1085 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 KREMEN1Q96MU8 473 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 NAPGQ99747 312 aaPredicted RBP23.16■■□□□ 1.3
SPAST-204ENST00000621856 PI4K2AQ9BTU6 479 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 L2HGDHQ9H9P8 463 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 C1orf112Q9NSG2 853 aa23.16■■□□□ 1.3
SPAST-204ENST00000621856 CASP8AP2Q9UKL3 1982 aa23.15■■□□□ 1.3
SPAST-204ENST00000621856 PHACTR2O75167 634 aa23.15■■□□□ 1.3
SPAST-204ENST00000621856 ERLIN2O94905 339 aa23.15■■□□□ 1.3
SPAST-204ENST00000621856 BMS1Q14692 1282 aaKnown RBP23.15■■□□□ 1.3
SPAST-204ENST00000621856 C10orf76Q5T2E6 689 aa23.15■■□□□ 1.3
SPAST-204ENST00000621856 HELQQ8TDG4 1101 aa23.15■■□□□ 1.3
SPAST-204ENST00000621856 CPB2Q96IY4 423 aa23.15■■□□□ 1.3
SPAST-204ENST00000621856 SMIM35A0A1B0GVV1 85 aa23.14■■□□□ 1.3
SPAST-204ENST00000621856 MBLAC1A4D2B0 266 aaPredicted RBP23.14■■□□□ 1.3
SPAST-204ENST00000621856 APLP1P51693 650 aa23.14■■□□□ 1.3
SPAST-204ENST00000621856 AP3M2P53677 418 aa23.14■■□□□ 1.3
SPAST-204ENST00000621856 OSTNP61366 133 aa23.14■■□□□ 1.3
SPAST-204ENST00000621856 CDC42EP1Q00587 391 aa23.14■■□□□ 1.3
SPAST-204ENST00000621856 TMEM62Q0P6H9 643 aa23.14■■□□□ 1.3
SPAST-204ENST00000621856 KIZQ2M2Z5 673 aa23.14■■□□□ 1.3
SPAST-204ENST00000621856 WDR49Q8IV35 697 aa23.14■■□□□ 1.3
SPAST-204ENST00000621856 OR5B17Q8NGF7 314 aa23.14■■□□□ 1.3
SPAST-204ENST00000621856 TATDN2Q93075 761 aa23.14■■□□□ 1.3
SPAST-204ENST00000621856 MYADML2A6NDP7 307 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 KPNA6O60684 536 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 CLSTN1O94985 981 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 PURAQ00577 322 aaKnown RBP23.13■■□□□ 1.29
SPAST-204ENST00000621856 ALKBH5Q6P6C2 394 aaKnown RBP23.13■■□□□ 1.29
SPAST-204ENST00000621856 RUFY4Q6ZNE9 571 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 ELMO3Q96BJ8 720 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 FAM81BQ96LP2 452 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 GCOM2Q9BZD3 368 aaPredicted RBP23.13■■□□□ 1.29
SPAST-204ENST00000621856 PDZD7Q9H5P4 517 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 SPC25Q9HBM1 224 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 NAGPAQ9UK23 515 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 GINS2Q9Y248 185 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 C17orf102A2RUQ5 167 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 DDX3XO00571 662 aaKnown RBP eCLIP23.13■■□□□ 1.296e-7■■■■□ 23
SPAST-204ENST00000621856 SLU7O95391 586 aaKnown RBP23.13■■□□□ 1.29
SPAST-204ENST00000621856 VNN1O95497 513 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 MCF2P10911 925 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 ARF4P18085 180 aaPredicted RBP23.13■■□□□ 1.29
SPAST-204ENST00000621856 TNFAIP3P21580 790 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 GTF2F1P35269 517 aaKnown RBP eCLIP23.13■■□□□ 1.29
SPAST-204ENST00000621856 GJA9P57773 515 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 NAB2Q15742 525 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 ENOSF1Q7L5Y1 443 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 CEP120Q8N960 986 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 U2AF1L4Q8WU68 220 aaKnown RBP23.13■■□□□ 1.29
SPAST-204ENST00000621856 SHC3Q92529 594 aa23.13■■□□□ 1.29
SPAST-204ENST00000621856 RPF1Q9H9Y2 349 aaKnown RBP23.13■■□□□ 1.29
SPAST-204ENST00000621856 GPR25O00155 361 aa23.12■■□□□ 1.29
SPAST-204ENST00000621856 TSPAN1O60635 241 aa23.12■■□□□ 1.29
SPAST-204ENST00000621856 TACC1O75410 805 aa23.12■■□□□ 1.29
SPAST-204ENST00000621856 TRPA1O75762 1119 aa23.12■■□□□ 1.29
SPAST-204ENST00000621856 TRIM32Q13049 653 aa23.12■■□□□ 1.29
SPAST-204ENST00000621856 HIC1Q14526 733 aa23.12■■□□□ 1.29
SPAST-204ENST00000621856 GNASQ5JWF2 1037 aa23.12■■□□□ 1.29
SPAST-204ENST00000621856 C7orf31Q8N865 590 aa23.12■■□□□ 1.29
SPAST-204ENST00000621856 LNX1Q8TBB1 728 aaPredicted RBP23.12■■□□□ 1.29
SPAST-204ENST00000621856 ADAMTS10Q9H324 1103 aa23.12■■□□□ 1.29
SPAST-204ENST00000621856 SEPT11Q9NVA2 429 aaKnown RBP23.12■■□□□ 1.29
SPAST-204ENST00000621856 TRIP12Q14669 1992 aaPredicted RBP23.11■■□□□ 1.29
SPAST-204ENST00000621856 SEPT4O43236 478 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 MOCS3O95396 460 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 RARBP10826 455 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 GNAT1P11488 350 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 CAP1Q01518 475 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 GCNT1Q02742 428 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 CACNB2Q08289 660 aaPredicted RBP23.11■■□□□ 1.29
SPAST-204ENST00000621856 GLYCTKQ8IVS8 523 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 FAM71AQ8IYT1 594 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 DNAJB3Q8WWF6 145 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 MTG1Q9BT17 334 aaPredicted RBP23.11■■□□□ 1.29
SPAST-204ENST00000621856 PACSIN1Q9BY11 444 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 RNF186Q9NXI6 227 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 HDAC6Q9UBN7 1215 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 ANK1P16157 1881 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 TREHO43280 583 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 IL18RAPO95256 599 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 PGK1P00558 417 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 FGFR4P22455 802 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 NAP1L1P55209 391 aaKnown RBP23.11■■□□□ 1.29
SPAST-204ENST00000621856 ADAM17P78536 824 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 ZNF200P98182 395 aaPredicted RBP23.11■■□□□ 1.29
SPAST-204ENST00000621856 NCOA4Q13772 614 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 DUOXA2Q1HG44 320 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 TRIM58Q8NG06 486 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 ALS2CR12Q96Q35 445 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 AGPAT1Q99943 283 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms