RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 KCNE1P15382 129 aa16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 NMT1P30419 496 aaKnown RBP16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 NDUFV1P49821 464 aa16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 AMPD3Q01432 767 aa16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 HSP90AA2PQ14568 343 aaPredicted RBP16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 NOLC1Q14978 699 aaKnown RBP eCLIP16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 PTPN14Q15678 1187 aa16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 RESP18Q5W5W9 173 aa16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 ZBTB33Q86T24 672 aa16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 PYM1Q9BRP8 204 aaKnown RBP16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 MAGEF1Q9HAY2 307 aa16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 ADAM28Q9UKQ2 775 aa16.92■□□□□ 0.3
SRGAP2C-205ENST00000617209 PDCD11Q14690 1871 aaKnown RBP16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 A0A0B4J269 797 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 HNRNPDLO14979 420 aaKnown RBP16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 CLASP2O75122 1294 aaKnown RBP16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 CLTAP09496 248 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 SRGAP2BP0DMP2 458 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 LIG4P49917 911 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 KRT85P78386 507 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 ZC2HC1CQ53FD0 456 aaPredicted RBP16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 KIAA0319Q5VV43 1072 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 ADALQ6DHV7 355 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 SFR1Q86XK3 245 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 VN1R2Q8NFZ6 395 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 BICD1Q96G01 975 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 UROC1Q96N76 676 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 UHRF1Q96T88 793 aaPredicted RBP16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 PAAF1Q9BRP4 392 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 HERC2P3Q9BVR0 1158 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 HAPLN2Q9GZV7 340 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 PLEKHA5Q9HAU0 1116 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 MRPL17Q9NRX2 175 aaKnown RBP16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 SLC38A7Q9NVC3 462 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 FAM13BQ9NYF5 915 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 CNTN3Q9P232 1028 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 ANKFY1Q9P2R3 1169 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 CD207Q9UJ71 328 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 STYXL1Q9Y6J8 313 aa16.91■□□□□ 0.3
SRGAP2C-205ENST00000617209 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 TMEM189-UBE2V1I3L0A0 370 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 POLR2DO15514 142 aaKnown RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 MBTPS2O43462 519 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 TADA2AO75478 443 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 C1RP00736 705 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 ADRB2P07550 413 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 HOXB8P17481 243 aaPredicted RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 OSTNP61366 133 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 DSG1Q02413 1049 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 SMAD4Q13485 552 aaKnown RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 ALCAMQ13740 583 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 SMAD2Q15796 467 aaKnown RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 SLC10A6Q3KNW5 377 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 USP41Q3LFD5 358 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 HERC4Q5GLZ8 1057 aaPredicted RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 SLFN12LQ6IEE8 588 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 FUT10Q6P4F1 479 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 DCLRE1AQ6PJP8 1040 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 TAS1R1Q7RTX1 841 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 PPFIBP1Q86W92 1011 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 CCDC65Q8IXS2 484 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 SMRP1Q8NCR6 262 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 LEO1Q8WVC0 666 aaPredicted RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 DDX27Q96GQ7 796 aaKnown RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 SNX27Q96L92 541 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 SPATA32Q96LK8 384 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 ZMAT2Q96NC0 199 aaKnown RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 TSPAN18Q96SJ8 248 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 EMILIN2Q9BXX0 1053 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 GPR62Q9BZJ7 368 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 TRIM9Q9C026 710 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 SCAND2PQ9GZW5 306 aaPredicted RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 MRPL44Q9H9J2 332 aaKnown RBP16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 RXFP1Q9HBX9 757 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 PANK4Q9NVE7 773 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 PRKAG3Q9UGI9 489 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 PCDHB13Q9Y5F0 798 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 HCFC2Q9Y5Z7 792 aa16.9■□□□□ 0.3
SRGAP2C-205ENST00000617209 F8W810 466 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 OGTO15294 1046 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 MEFVO15553 781 aaPredicted RBP16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 FAM189A1O60320 539 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 IDEP14735 1019 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 CMA1P23946 247 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 GLUD2P49448 558 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 POU5F1Q01860 360 aaKnown RBP16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 SLC39A4Q6P5W5 647 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 SLC22A17Q8WUG5 538 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 AUTS2Q8WXX7 1259 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 CASP10Q92851 521 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 DHX58Q96C10 678 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 KLHL5Q96PQ7 755 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 C7orf25Q9BPX7 421 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 KCNH3Q9ULD8 1083 aa16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 BARX2Q9UMQ3 279 aaPredicted RBP16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 SF3B1O75533 1304 aaKnown RBP eCLIP16.89■□□□□ 0.29
SRGAP2C-205ENST00000617209 TTC26A0AVF1 554 aa16.88■□□□□ 0.29
SRGAP2C-205ENST00000617209 CASTOR2A6NHX0 329 aa16.88■□□□□ 0.29
SRGAP2C-205ENST00000617209 URODP06132 367 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms