RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	APTX	Q7Z2E3	356 aa	Known RBP	24.98	■■□□□ 1.59
ACACA-238	ENST00000616352	TMC2	Q8TDI7	906 aa		24.98	■■□□□ 1.59
ACACA-238	ENST00000616352	PGBD4	Q96DM1	585 aa		24.98	■■□□□ 1.59
ACACA-238	ENST00000616352	PLEKHA5	Q9HAU0	1116 aa		24.98	■■□□□ 1.59
ACACA-238	ENST00000616352	PDE11A	Q9HCR9	933 aa		24.98	■■□□□ 1.59
ACACA-238	ENST00000616352	TOPORS	Q9NS56	1045 aa	Predicted RBP	24.98	■■□□□ 1.59
ACACA-238	ENST00000616352	TMEM161A	Q9NX61	479 aa		24.98	■■□□□ 1.59
ACACA-238	ENST00000616352	LIMA1	Q9UHB6	759 aa	Known RBP	24.98	■■□□□ 1.59
ACACA-238	ENST00000616352	LRRC10B	A6NIK2	292 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	IL18RAP	O95256	599 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	ACTN1	P12814	892 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	KRT13	P13646	458 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	RGS19	P49795	217 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	VAMP7	P51809	220 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	YARS	P54577	528 aa	Known RBP	24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	DLG4	P78352	724 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	CLDN10	P78369	228 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	XKR4	Q5GH76	650 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	TMEM240	Q5SV17	173 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	C1orf220	Q5T0J3	134 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	SLC35C1	Q96A29	364 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	LBHD1	Q9BQE6	289 aa	Predicted RBP	24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	CXCL16	Q9H2A7	254 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	PARP2	Q9UGN5	583 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	GIT1	Q9Y2X7	761 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	FSD2	A1L4K1	749 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	LACTBL1	A8MY62	500 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	CDK11B	P21127	795 aa	Known RBP	24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	MTIF2	P46199	727 aa	Known RBP	24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	PSRC1	Q6PGN9	363 aa	Predicted RBP	24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	ZNF365	Q70YC5	407 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	CREBRF	Q8IUR6	639 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	CCDC127	Q96BQ5	260 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	TUBGCP2	Q9BSJ2	902 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	ASB7	Q9H672	318 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	CNTN3	Q9P232	1028 aa		24.97	■■□□□ 1.59
ACACA-238	ENST00000616352	COL4A6	Q14031	1691 aa		24.96	■■□□□ 1.59
ACACA-238	ENST00000616352	LRRIQ3	A6PVS8	624 aa	Predicted RBP	24.96	■■□□□ 1.59
ACACA-238	ENST00000616352	PPP2R3A	Q06190	1150 aa		24.96	■■□□□ 1.59
ACACA-238	ENST00000616352	SURF1	Q15526	300 aa		24.96	■■□□□ 1.59
ACACA-238	ENST00000616352	CD302	Q8IX05	232 aa		24.96	■■□□□ 1.59
ACACA-238	ENST00000616352	RNF169	Q8NCN4	708 aa		24.96	■■□□□ 1.59
ACACA-238	ENST00000616352	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	24.96	■■□□□ 1.59	3e-8	■■□□□ 12.9
ACACA-238	ENST00000616352	RSAD1	Q9HA92	442 aa		24.96	■■□□□ 1.59
ACACA-238	ENST00000616352	UBN1	Q9NPG3	1134 aa		24.96	■■□□□ 1.59
ACACA-238	ENST00000616352	RNF19A	Q9NV58	838 aa		24.96	■■□□□ 1.59
ACACA-238	ENST00000616352	KLK14	Q9P0G3	267 aa		24.96	■■□□□ 1.59
ACACA-238	ENST00000616352	PTPRJ	Q12913	1337 aa		24.95	■■□□□ 1.59
ACACA-238	ENST00000616352	FGB	P02675	491 aa		24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	TRIM49	P0CI25	452 aa		24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	TRIM49C	P0CI26	452 aa		24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	WDR5	P61964	334 aa	Known RBP	24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	MAN2A1	Q16706	1144 aa		24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	MIIP	Q5JXC2	388 aa		24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	OTOP2	Q7RTS6	562 aa		24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	GSTCD	Q8NEC7	633 aa		24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	FAM212A	Q96EL1	285 aa		24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	ZMAT2	Q96NC0	199 aa	Known RBP	24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	LAMA2	P24043	3122 aa	Known RBP	24.95	■■□□□ 1.58
ACACA-238	ENST00000616352	INPPL1	O15357	1258 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	IBSP	P21815	317 aa	Predicted RBP	24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	MLH1	P40692	756 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	UVSSA	Q2YD98	709 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	DCAF17	Q5H9S7	520 aa	Predicted RBP	24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	USP37	Q86T82	979 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	NPAS4	Q8IUM7	802 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	EFCAB13	Q8IY85	973 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	ANKRD20A12P	Q8NF67	263 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	ZFP42	Q96MM3	310 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	FNBP1	Q96RU3	617 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	GAD1	Q99259	594 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	POP1	Q99575	1024 aa	Known RBP	24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	CGRRF1	Q99675	332 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	ARL5C	A6NH57	179 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	DLAT	P10515	647 aa	Known RBP	24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	KCNE1	P15382	129 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	MAGEA10	P43363	369 aa	Predicted RBP	24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	CLLU1OS	Q5K130	101 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	TCERG1L	Q5VWI1	586 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	RNF216	Q9NWF9	866 aa	Predicted RBP	24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	TAB2	Q9NYJ8	693 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	C2CD2	Q9Y426	696 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	PCDHB7	Q9Y5E2	793 aa		24.94	■■□□□ 1.58
ACACA-238	ENST00000616352	SCN1A	P35498	2009 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	PTGES	O14684	152 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	OFD1	O75665	1012 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	NFIC	P08651	508 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	AFF1	P51825	1210 aa	Known RBP	24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	COPB1	P53618	953 aa	Known RBP	24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	DEFB103A	P81534	67 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	FANCC	Q00597	558 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	PPP3CA	Q08209	521 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	JADE1	Q6IE81	842 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	WDR49	Q8IV35	697 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	ZNF516	Q92618	1163 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	TOP1MT	Q969P6	601 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	TSPAN18	Q96SJ8	248 aa		24.93	■■□□□ 1.58
ACACA-238	ENST00000616352	RANBP2	P49792	3224 aa	Known RBP	24.92	■■□□□ 1.58

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