RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MINDY3Q9H8M7 445 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 ANK1P16157 1881 aa12.46□□□□□ -0.42
SLIRP-212ENST00000613856 GRXCR2A6NFK2 248 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 LGALS16A8MUM7 142 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 ABLIM1O14639 778 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 EXOC3O60645 756 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 BAIAP3O94812 1187 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 GJB5O95377 273 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 TPM2P07951 284 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 PRKCSHP14314 528 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-212ENST00000613856 DARSP14868 501 aaKnown RBP12.45□□□□□ -0.42
SLIRP-212ENST00000613856 PROZP22891 400 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 MTIF2P46199 727 aaKnown RBP12.45□□□□□ -0.42
SLIRP-212ENST00000613856 CASP4P49662 377 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 CYP2J2P51589 502 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 CRYBB1P53674 252 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-212ENST00000613856 PRPF4BQ13523 1007 aaKnown RBP12.45□□□□□ -0.42
SLIRP-212ENST00000613856 MBTPS1Q14703 1052 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 PTGISQ16647 500 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 KIZQ2M2Z5 673 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 FILIP1LQ4L180 1135 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 CEP135Q66GS9 1140 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.45□□□□□ -0.42
SLIRP-212ENST00000613856 TSHZ1Q6ZSZ6 1077 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 HFE2Q6ZVN8 426 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 FAM186BQ8IYM0 893 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 POMGNT1Q8WZA1 660 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 EEF2KMTQ96G04 330 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 BORCS6Q96GS4 357 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 PPP1R9BQ96SB3 815 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 TARS2Q9BW92 718 aaKnown RBP12.45□□□□□ -0.42
SLIRP-212ENST00000613856 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
SLIRP-212ENST00000613856 INTS13Q9NVM9 706 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 TAB2Q9NYJ8 693 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 ARMCX3Q9UH62 379 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-212ENST00000613856 TNFSF13BQ9Y275 285 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 FRMD4BQ9Y2L6 1034 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 TRPV2Q9Y5S1 764 aa12.45□□□□□ -0.42
SLIRP-212ENST00000613856 CITO14578 2027 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 A0A0B4J269 797 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 M0QZ92 97 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 TSPAN1O60635 241 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 ERLIN2O94905 339 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 SFPQP23246 707 aaKnown RBP eCLIP12.44□□□□□ -0.42
SLIRP-212ENST00000613856 EIF4BP23588 611 aaKnown RBP12.44□□□□□ -0.42
SLIRP-212ENST00000613856 MCL1Q07820 350 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 RBL2Q08999 1139 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 MGAT3Q09327 533 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 NR1I3Q14994 352 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 TRIM71Q2Q1W2 868 aaKnown RBP12.44□□□□□ -0.42
SLIRP-212ENST00000613856 MIIPQ5JXC2 388 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 ATF7IP2Q5U623 682 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 TRAF7Q6Q0C0 670 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 MPZL3Q6UWV2 235 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 INTS8Q75QN2 995 aaKnown RBP12.44□□□□□ -0.42
SLIRP-212ENST00000613856 LRRC8DQ7L1W4 858 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 GPD1LQ8N335 351 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 ZNF668Q96K58 619 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-212ENST00000613856 NAP1L5Q96NT1 182 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-212ENST00000613856 TGS1Q96RS0 853 aaKnown RBP12.44□□□□□ -0.42
SLIRP-212ENST00000613856 PPP1R16BQ96T49 567 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 OSMRQ99650 979 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 CELF4Q9BZC1 486 aaKnown RBP12.44□□□□□ -0.42
SLIRP-212ENST00000613856 OSBPL7Q9BZF2 842 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 PTPRHQ9HD43 1115 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 NOD1Q9Y239 953 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 TECTAO75443 2155 aa12.44□□□□□ -0.42
SLIRP-212ENST00000613856 CFAP54Q96N23 3096 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 TTLL13PA6NNM8 815 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 N4BP3O15049 544 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 CLDN3O15551 220 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 B4GALT5O43286 388 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 EXTL3O43909 919 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 LDHAP00338 332 aaKnown RBP12.43□□□□□ -0.42
SLIRP-212ENST00000613856 CKBP12277 381 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 AXLP30530 894 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 PBX1P40424 430 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 TMEM62Q0P6H9 643 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 BFSP2Q13515 415 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 NOLC1Q14978 699 aaKnown RBP eCLIP12.43□□□□□ -0.42
SLIRP-212ENST00000613856 SNRNP35Q16560 246 aaKnown RBP12.43□□□□□ -0.42
SLIRP-212ENST00000613856 VWA3BQ502W6 1294 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 FAM26DQ5JW98 314 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 HAPLN2Q9GZV7 340 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 VPS16Q9H269 839 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 PCIF1Q9H4Z3 704 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 LMCD1Q9NZU5 365 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 ANKFY1Q9P2R3 1169 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 AGO2Q9UKV8 859 aaKnown RBP12.43□□□□□ -0.42
SLIRP-212ENST00000613856 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.43□□□□□ -0.42
SLIRP-212ENST00000613856 CDY2AQ9Y6F7 541 aa12.43□□□□□ -0.42
SLIRP-212ENST00000613856 PDCD11Q14690 1871 aaKnown RBP12.42□□□□□ -0.42
SLIRP-212ENST00000613856 ITIH6Q6UXX5 1313 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 A0A1W2PQC6 194 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 DCXO43602 365 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 FAM189A1O60320 539 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 CXCL10P02778 98 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 ADRB2P07550 413 aa12.42□□□□□ -0.42
SLIRP-212ENST00000613856 MCF2P10911 925 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms