RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 SRGNP10124 158 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 P3H1Q32P28 736 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 PRUNE1Q86TP1 453 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 SCN4BQ8IWT1 228 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 PLA2G12BQ9BX93 195 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 TMEM51Q9NW97 253 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 PDS5AQ29RF7 1337 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 PPP1R37O75864 691 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 HNRNPCP07910 306 aaKnown RBP eCLIP18.36■□□□□ 0.537e-7■■■□□ 18.7
HMGXB3-206ENST00000613459 ARSEP51690 589 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 SNAP25P60880 206 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 CUL3Q13618 768 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 EPHA10Q5JZY3 1008 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 SWSAP1Q6NVH7 229 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 FASTKD5Q7L8L6 764 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 ROPN1BQ9BZX4 212 aaPredicted RBP18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 ROPN1Q9HAT0 212 aaPredicted RBP18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 PALMDQ9NP74 551 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 HDAC6Q9UBN7 1215 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 ECE2O60344 883 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 CDH16O75309 829 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 ACTR2P61160 394 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 POU5F1BQ06416 359 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 RAPGEF5Q92565 580 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 PPP1R16BQ96T49 567 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 EGFL8Q99944 293 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 PCDHGB4Q9UN71 923 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 F5H6K3 240 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 CDH6P55285 790 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 KLRC3Q07444 240 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 GLYCTKQ8IVS8 523 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 C2orf69Q8N8R5 385 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 DHX35Q9H5Z1 703 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 PCSK1NQ9UHG2 260 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 A0A1W2PQJ5 194 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 TEX33O43247 280 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 DAB1O75553 588 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 LRRC8EQ6NSJ5 796 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 PRMT1Q99873 361 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 RANBP17Q9H2T7 1088 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 TRABDQ9H4I3 376 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 MLXIPLQ9NP71 852 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 TMEM260Q9NX78 707 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 PKD2L2Q9NZM6 624 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 INPP5FQ9Y2H2 1132 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 ESYT3A0FGR9 886 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 A8MXQ7 604 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 LBRQ14739 615 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 EDRF1Q3B7T1 1238 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 TRIM60Q495X7 471 aa18.36■□□□□ 0.53
HMGXB3-206ENST00000613459 EIF3HO15372 352 aaKnown RBP eCLIP18.35■□□□□ 0.532e-6■■■■■ 28.7
HMGXB3-206ENST00000613459 EIF3EP60228 445 aaKnown RBP18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 LRRC14Q15048 493 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 HLFQ16534 295 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 RASGRP2Q7LDG7 609 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 CEP55Q53EZ4 464 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 POTEAQ6S8J7 498 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 RHPN2Q8IUC4 686 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 FAM217BQ9NTX9 383 aaPredicted RBP18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 ABCF3Q9NUQ8 709 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 ZFATQ9P243 1243 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 SPATA31A3Q5VYP0 1347 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 C16orf96A6NNT2 1141 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 P4HA2O15460 535 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 GUCY1A3Q02108 690 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 GEMIN8Q9NWZ8 242 aaKnown RBP18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 APEX2Q9UBZ4 518 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 RHOBTB3O94955 611 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 DAB2P98082 770 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 EXOSC10Q01780 885 aaKnown RBP18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 PIGHQ14442 188 aaPredicted RBP18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 BTBD8Q5XKL5 378 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 ASIC4Q96FT7 647 aa18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 FRMD8Q9BZ67 464 aaPredicted RBP18.35■□□□□ 0.53
HMGXB3-206ENST00000613459 H0Y626 953 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 GOLGA8TH3BQL2 631 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 TRIM16O95361 564 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 MMP10P09238 476 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 TRPC1P48995 793 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 ZNF235Q14590 738 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 ANO4Q32M45 955 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 SBK1Q52WX2 424 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 FASTKD1Q53R41 847 aaKnown RBP18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 TBC1D19Q8N5T2 526 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 DGAT1O75907 488 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 DAB2IPQ5VWQ8 1189 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 ADSSL1Q8N142 457 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 USP6NLQ92738 828 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 ZNF512BQ96KM6 892 aaPredicted RBP18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 KCNK16Q96T55 309 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 TRIM9Q9C026 710 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 PCDHB8Q9UN66 801 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 CCDC159P0C7I6 412 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 MMP19Q99542 508 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 CYP4F11Q9HBI6 524 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 MAP3K20Q9NYL2 800 aaKnown RBP18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 CCND1P24385 295 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 TRAPPC11Q7Z392 1133 aa18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 SETD3Q86TU7 594 aaPredicted RBP18.34■□□□□ 0.53
HMGXB3-206ENST00000613459 PSMC3IPQ9P2W1 217 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms