RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 PLA2G3Q9NZ20 509 aa5.55□□□□□ -1.52
SMCHD1-213ENST00000609587 MTSS1O43312 755 aa5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 ENDOD1O94919 500 aa5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 ADAM8P78325 824 aa5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 SAFB2Q14151 953 aaKnown RBP eCLIP5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 ZNF267Q14586 743 aaPredicted RBP5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 GRM7Q14831 915 aa5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 SEPT2Q15019 361 aa5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 ATAT1Q5SQI0 421 aa5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 C1orf210Q8IVY1 113 aa5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 HPS3Q969F9 1004 aa5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 UHRF1Q96T88 793 aaPredicted RBP5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 RCAN3Q9UKA8 241 aa5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 PCDHA13Q9Y5I0 950 aa5.54□□□□□ -1.52
SMCHD1-213ENST00000609587 VSTM5A8MXK1 200 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 ERC2O15083 957 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 GYPEP15421 78 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 LMO1P25800 156 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 IL12RB1P42701 662 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 PER3P56645 1201 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 DUSP2Q05923 314 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 FOXL1Q12952 345 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 IL10RAQ13651 578 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 RIN1Q13671 783 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 ARHGAP29Q52LW3 1261 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 PPP4R3AQ6IN85 833 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 B3GNT9Q6UX72 402 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 MAMDC4Q6UXC1 1216 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 Q6ZVL8 140 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 ADGRE4PQ86SQ3 457 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 RHOT1Q8IXI2 618 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 GRAMD1CQ8IYS0 662 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 PRR18Q8N4B5 295 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 SLC35G2Q8TBE7 412 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 HOXB13Q92826 284 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 MVB12AQ96EY5 273 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 PLEKHG4BQ96PX9 1271 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 GPHA2Q96T91 129 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 MMRN2Q9H8L6 949 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 BCO1Q9HAY6 547 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 GPRC5DQ9NZD1 345 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 NCDNQ9UBB6 729 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 DMRT1Q9Y5R6 373 aa5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 CFAP20Q9Y6A4 193 aaKnown RBP5.53□□□□□ -1.52
SMCHD1-213ENST00000609587 NRP1O14786 923 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 PRC1O43663 620 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 CTNND1O60716 968 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 GASTP01350 101 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 RPLP2P05387 115 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 ADH4P08319 380 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 ACRV1P26436 265 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 CRHR1P34998 444 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 FXR1P51114 621 aaKnown RBP eCLIP5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 PGS1Q32NB8 556 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 DPY19L2P1Q6NXN4 242 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 ZNF627Q7L945 461 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 PQLC1Q8N2U9 271 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 OR7D4Q8NG98 312 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 DIS3LQ8TF46 1054 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 KAT5Q92993 513 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 RUNDC1Q96C34 613 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 C1GALT1C1Q96EU7 318 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 FAM89AQ96GI7 184 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 TAAR9Q96RI9 348 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 MPHOSPH9Q99550 1183 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 MANSC1Q9H8J5 431 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 OBP2AQ9NY56 170 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 TRPS1Q9UHF7 1281 aa5.52□□□□□ -1.53
SMCHD1-213ENST00000609587 A0A1W2PRX2 142 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 ITGA10O75578 1167 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 MSX2P35548 267 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 SREBF1P36956 1147 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 SLC6A9P48067 706 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 TBX4P57082 545 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 TUBA3CQ13748 450 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 TUBA3EQ6PEY2 450 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 MRGPRGQ86SM5 289 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 TTC7BQ86TV6 843 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 DRC7Q8IY82 874 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 CMTM4Q8IZR5 234 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 LILRA3Q8N6C8 439 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 OR5M3Q8NGP4 307 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 ZNF483Q8TF39 744 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 CDC5LQ99459 802 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 PRDM11Q9NQV5 511 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 LANCL2Q9NS86 450 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 C1orf112Q9NSG2 853 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 TDP1Q9NUW8 608 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 SIK3Q9Y2K2 1263 aa5.51□□□□□ -1.53
SMCHD1-213ENST00000609587 ADCY6O43306 1168 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 SGTAO43765 313 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 PTPN7P35236 360 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 CASRP41180 1078 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 NPEPPSP55786 919 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 CDC42EP1Q00587 391 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 DSC2Q02487 901 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 COL10A1Q03692 680 aa5.5□□□□□ -1.53
SMCHD1-213ENST00000609587 PDZD4Q76G19 769 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms