RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CDR2LQ86X02 465 aaPredicted RBP23.33■■□□□ 1.32
USP6NL-204ENST00000606752 RAET1EQ8TD07 263 aa23.33■■□□□ 1.32
USP6NL-204ENST00000606752 PTPRJQ12913 1337 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 TSPAN1O60635 241 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 ZC3H11AO75152 810 aaKnown RBP eCLIP23.32■■□□□ 1.32
USP6NL-204ENST00000606752 GFPT2O94808 682 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 PTK2Q05397 1052 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 TMEM62Q0P6H9 643 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 MAP3K21Q5TCX8 1036 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 ZNF710Q8N1W2 664 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 PXYLP1Q8TE99 480 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 DNAJB3Q8WWF6 145 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 ERO1AQ96HE7 468 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 NT5C1BQ96P26 610 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 PDZD7Q9H5P4 517 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 PCDHA13Q9Y5I0 950 aa23.32■■□□□ 1.32
USP6NL-204ENST00000606752 EVI5O60447 810 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 ANXA13P27216 316 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 GNG11P61952 73 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 GFPT1Q06210 699 aaPredicted RBP23.31■■□□□ 1.32
USP6NL-204ENST00000606752 PCBP1Q15365 356 aaKnown RBP eCLIP23.31■■□□□ 1.32
USP6NL-204ENST00000606752 TDRD10Q5VZ19 366 aaKnown RBP23.31■■□□□ 1.32
USP6NL-204ENST00000606752 WDR49Q8IV35 697 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 NME8Q8N427 588 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 CPB2Q96IY4 423 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 IFIH1Q9BYX4 1025 aaKnown RBP23.31■■□□□ 1.32
USP6NL-204ENST00000606752 GINS2Q9Y248 185 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 A0A1B0GUA9 196 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 FOXN3O00409 490 aaPredicted RBP23.31■■□□□ 1.32
USP6NL-204ENST00000606752 KIF5CO60282 957 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 PNMA6AP0CW24 399 aaPredicted RBP23.31■■□□□ 1.32
USP6NL-204ENST00000606752 VAV2P52735 878 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 MFAP3P55082 362 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 POU5F1Q01860 360 aaKnown RBP23.31■■□□□ 1.32
USP6NL-204ENST00000606752 BIRC3Q13489 604 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 ARHGEF6Q15052 776 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 SLC18A3Q16572 532 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 ZNF571Q7Z3V5 609 aaPredicted RBP23.31■■□□□ 1.32
USP6NL-204ENST00000606752 PPM1KQ8N3J5 372 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 KLHDC9Q8NEP7 349 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 HELQQ8TDG4 1101 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 ADAMTS1Q9UHI8 967 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 DNAI1Q9UI46 699 aa23.31■■□□□ 1.32
USP6NL-204ENST00000606752 FKTNO75072 461 aa23.3■■□□□ 1.32
USP6NL-204ENST00000606752 ABL1P00519 1130 aa23.3■■□□□ 1.32
USP6NL-204ENST00000606752 HLA-DRAP01903 254 aa23.3■■□□□ 1.32
USP6NL-204ENST00000606752 KYAT1Q16773 422 aa23.3■■□□□ 1.32
USP6NL-204ENST00000606752 NBPF20Q3BBV1 942 aa23.3■■□□□ 1.32
USP6NL-204ENST00000606752 CEP120Q8N960 986 aa23.3■■□□□ 1.32
USP6NL-204ENST00000606752 JAKMIP2Q96AA8 810 aa23.3■■□□□ 1.32
USP6NL-204ENST00000606752 FAM84AQ96KN4 292 aa23.3■■□□□ 1.32
USP6NL-204ENST00000606752 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.3■■□□□ 1.32
USP6NL-204ENST00000606752 RPF1Q9H9Y2 349 aaKnown RBP23.3■■□□□ 1.32
USP6NL-204ENST00000606752 CDHR5Q9HBB8 845 aa23.3■■□□□ 1.32
USP6NL-204ENST00000606752 KRT86O43790 486 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 CLTAP09496 248 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 DARSP14868 501 aaKnown RBP23.29■■□□□ 1.32
USP6NL-204ENST00000606752 CST5P28325 142 aaPredicted RBP23.29■■□□□ 1.32
USP6NL-204ENST00000606752 MAGEA1P43355 309 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 OSTNP61366 133 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 NCBP1Q09161 790 aaKnown RBP23.29■■□□□ 1.32
USP6NL-204ENST00000606752 WDR44Q5JSH3 913 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 CCDC122Q5T0U0 273 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 TAF2Q6P1X5 1199 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 OR5B17Q8NGF7 314 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 FAM212AQ96EL1 285 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 FAM81BQ96LP2 452 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 OSMRQ99650 979 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 IRX2Q9BZI1 471 aaPredicted RBP23.29■■□□□ 1.32
USP6NL-204ENST00000606752 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.29■■□□□ 1.321e-6■■■■■ 69.5
USP6NL-204ENST00000606752 A0A087X0T9 212 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 RCCD1A6NED2 376 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 VNN1O95497 513 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 FAM228BP0C875 321 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 EIF4BP23588 611 aaKnown RBP23.29■■□□□ 1.32
USP6NL-204ENST00000606752 PIK3CAP42336 1068 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 KIF5AQ12840 1032 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 KCNA10Q16322 511 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 VPS36Q86VN1 386 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 TATDN2Q93075 761 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 KREMEN1Q96MU8 473 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 ADPGKQ9BRR6 497 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 TSGA10Q9BZW7 698 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 LUC7LQ9NQ29 371 aaKnown RBP23.29■■□□□ 1.32
USP6NL-204ENST00000606752 SAGE1Q9NXZ1 904 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 MYO1AQ9UBC5 1043 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 GTF2IRD1Q9UHL9 959 aa23.29■■□□□ 1.32
USP6NL-204ENST00000606752 B4GALT4O60513 344 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 IL18RAPO95256 599 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 ASGR1P07306 291 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 STAG3L1P0CL83 205 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 FGFR4P22455 802 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 GCNT1Q02742 428 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 DUOXA2Q1HG44 320 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 ENOSF1Q7L5Y1 443 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 CATSPER4Q7RTX7 472 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 TXLNBQ8N3L3 684 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 KAT5Q92993 513 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 PI4K2AQ9BTU6 479 aa23.28■■□□□ 1.32
USP6NL-204ENST00000606752 LACRTQ9GZZ8 138 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms