RNA–Protein interactions for RNA: ENST00000606476.1

LINC00993-204, long intergenic non-protein coding RNA 993, human

TSL 5 BASIC

Gene LINC00993, Length 500 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00993-204	ENST00000606476	C4orf19	Q8IY42	314 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	EXOC8	Q8IYI6	725 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	URGCP	Q8TCY9	931 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	NEK9	Q8TD19	979 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	SNX29	Q8TEQ0	813 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	CLP1	Q92989	425 aa	Known RBP	4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	PPP2R3C	Q969Q6	453 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	ZNF689	Q96CS4	500 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	ZNF558	Q96NG5	402 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	CASD1	Q96PB1	797 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	TCF25	Q9BQ70	676 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	TMEM117	Q9H0C3	514 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	DHX33	Q9H6R0	707 aa	Known RBP	4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	TLE6	Q9H808	572 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	MINDY3	Q9H8M7	445 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	RC3H2	Q9HBD1	1191 aa	Known RBP	4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	TLR9	Q9NR96	1032 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	FAM105A	Q9NUU6	356 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	RNF19A	Q9NV58	838 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	NDFIP2	Q9NV92	336 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	LMCD1	Q9NZU5	365 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	LRWD1	Q9UFC0	647 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	PARP2	Q9UGN5	583 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	PUF60	Q9UHX1	559 aa	Known RBP	4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	PRG3	Q9Y2Y8	225 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	PCDHB6	Q9Y5E3	794 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	PCDHB2	Q9Y5E7	798 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	MICAL3	Q7RTP6	2002 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	NCOR1	O75376	2440 aa		4.88	□□□□□ -1.63
LINC00993-204	ENST00000606476	COL4A4	P53420	1690 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	IGKV6-21	A0A0C4DH24	114 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476		A0A0U1RQF3	1178 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	VWA3A	A6NCI4	1184 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	CCDC169	A6NNP5	214 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	C5orf67	F2Z3F1	127 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	B4GALT5	O43286	388 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	NPTXR	O95502	500 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	LINC00271	P0C7V0	271 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	MYB	P10242	640 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	HARS	P12081	509 aa	Known RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	ITGA4	P13612	1032 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	AKAP5	P24588	427 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	CDC25A	P30304	524 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	ALDH7A1	P49419	539 aa	Known RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	RARRES1	P49788	294 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	RAB27A	P51159	221 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	ERVFC1	P60507	584 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	FAM189B	P81408	668 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	KRT17	Q04695	432 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	DLX2	Q07687	328 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	RAD51AP2	Q09MP3	1159 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	HYAL1	Q12794	435 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	CAPS	Q13938	189 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	DHX8	Q14562	1220 aa	Known RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	MXD4	Q14582	209 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	LEXM	Q3ZCV2	418 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	NOMO2	Q5JPE7	1267 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	KRT79	Q5XKE5	535 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	LARP1B	Q659C4	914 aa	Known RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	KCNT2	Q6UVM3	1135 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	DTHD1	Q6ZMT9	781 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	LRRC55	Q6ZSA7	311 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	SRGAP1	Q7Z6B7	1085 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	CATSPER3	Q86XQ3	398 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	ZBTB8OS	Q8IWT0	167 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	DEPTOR	Q8TB45	409 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	SPPL3	Q8TCT6	385 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	AUTS2	Q8WXX7	1259 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	RABGGTA	Q92696	567 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	PGBD4	Q96DM1	585 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	PABPC5	Q96DU9	382 aa	Known RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	TMEM169	Q96HH4	297 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	CDK5RAP3	Q96JB5	506 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	TBC1D32	Q96NH3	1257 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	MTMR9	Q96QG7	549 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	CEP89	Q96ST8	783 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	HSD17B14	Q9BPX1	270 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	KIFC3	Q9BVG8	833 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	EIF2A	Q9BY44	585 aa	Known RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	MRPL9	Q9BYD2	267 aa	Known RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	RAB34	Q9BZG1	259 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	LMAN2L	Q9H0V9	348 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	BHMT2	Q9H2M3	363 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	ELAC1	Q9H777	363 aa	Known RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	IFT122	Q9HBG6	1241 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	XPNPEP1	Q9NQW7	623 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	TSHZ2	Q9NRE2	1034 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	ANKEF1	Q9NU02	776 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	AGPAT5	Q9NUQ2	364 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	DDX19A	Q9NUU7	478 aa	Known RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	SPG21	Q9NZD8	308 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	KLK14	Q9P0G3	267 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	KIAA1024	Q9UPX6	916 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	USP20	Q9Y2K6	914 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	HES2	Q9Y543	173 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	PTPRS	Q13332	1948 aa		4.87	□□□□□ -1.63
LINC00993-204	ENST00000606476	EVPL	Q92817	2033 aa		4.86	□□□□□ -1.63
LINC00993-204	ENST00000606476	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms