RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	NECTIN4	Q96NY8	510 aa		13.6	□□□□□ -0.23
STRN4-223	ENST00000602223	PPP1R10	Q96QC0	940 aa	Known RBP	13.6	□□□□□ -0.23
STRN4-223	ENST00000602223	USP28	Q96RU2	1077 aa		13.6	□□□□□ -0.23
STRN4-223	ENST00000602223	CDH22	Q9UJ99	828 aa		13.6	□□□□□ -0.23
STRN4-223	ENST00000602223	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	6e-6	■■■■■ 103.4
STRN4-223	ENST00000602223		H0YCG3	227 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	TADA2A	O75478	443 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	TOM1L1	O75674	476 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	KIF4A	O95239	1232 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	ADH1A	P07327	375 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	MTHFR	P42898	656 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	YARS	P54577	528 aa	Known RBP	13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	CEBPZ	Q03701	1054 aa	Known RBP	13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	TMEM31	Q5JXX7	168 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	RARS2	Q5T160	578 aa	Known RBP	13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	KIAA1841	Q6NSI8	718 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	ALKAL1	Q6UXT8	129 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	ZPBP2	Q6X784	338 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	ZBTB33	Q86T24	672 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	HSCB	Q8IWL3	235 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	C12orf76	Q8N812	135 aa	Predicted RBP	13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	HASPIN	Q8TF76	798 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	ZBTB45	Q96K62	511 aa	Predicted RBP	13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	RPGRIP1	Q96KN7	1286 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	B3GALT6	Q96L58	329 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	CLIC6	Q96NY7	704 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	TCHP	Q9BT92	498 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	LRFN3	Q9BTN0	628 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	POMK	Q9H5K3	350 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	SFXN1	Q9H9B4	322 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	PARVG	Q9HBI0	331 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	MUTYH	Q9UIF7	546 aa		13.59	□□□□□ -0.23
STRN4-223	ENST00000602223	SMIM28	A0A1B0GU29	152 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	FAM86C2P	A6NEL3	165 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	TMEM189-UBE2V1	I3L0A0	370 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	FAM13A	O94988	1023 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	C1R	P00736	705 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	SCP2	P22307	547 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	DDIT3	P35638	169 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	NASP	P49321	788 aa	Predicted RBP	13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	OSTN	P61366	133 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	SLC39A14	Q15043	492 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	RTP2	Q5QGT7	225 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	KANK3	Q6NY19	840 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	HAUS6	Q7Z4H7	955 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	MYCT1	Q8N699	235 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	SNX27	Q96L92	541 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	RIPOR3	Q96MK2	946 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	UROC1	Q96N76	676 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	ACAP3	Q96P50	834 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	FIZ1	Q96SL8	496 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	FNIP2	Q9P278	1114 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	ANKFY1	Q9P2R3	1169 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	STK17A	Q9UEE5	414 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	CCDC39	Q9UFE4	941 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	TRIO	O75962	3097 aa		13.58	□□□□□ -0.24
STRN4-223	ENST00000602223	TCHH	Q07283	1943 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223		K7ENM7	598 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	MEFV	O15553	781 aa	Predicted RBP	13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	TRAK2	O60296	914 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	GLUD1	P00367	558 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	PIGR	P01833	764 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	KRT18	P05783	430 aa	Known RBP	13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	WEE2	P0C1S8	567 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	HARS	P12081	509 aa	Known RBP	13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	KCNE1	P15382	129 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	COL9A1	P20849	921 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	TXLNA	P40222	546 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	CLCNKB	P51801	687 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	CREM	Q03060	361 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	MCL1	Q07820	350 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	ELAVL2	Q12926	359 aa	Known RBP	13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	UPP1	Q16831	310 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	ATAT1	Q5SQI0	421 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	FAM171A1	Q5VUB5	890 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	DCLRE1A	Q6PJP8	1040 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	TMC5	Q6UXY8	1006 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	GPR149	Q86SP6	731 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	KRI1	Q8N9T8	703 aa	Known RBP	13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	FEZF2	Q8TBJ5	459 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	RIN2	Q8WYP3	895 aa	Predicted RBP	13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	PIK3R5	Q8WYR1	880 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	ZMAT2	Q96NC0	199 aa	Known RBP	13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	HAPLN2	Q9GZV7	340 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	GOLGA2P5	Q9HBQ8	144 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	MAN1C1	Q9NR34	630 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	CNTN3	Q9P232	1028 aa		13.57	□□□□□ -0.24
STRN4-223	ENST00000602223	ZNF318	Q5VUA4	2279 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	SPDYE4	A6NLX3	237 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	PRR33	A8MZF0	331 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	CLDN3	O15551	220 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	TBCA	O75347	108 aa	Known RBP	13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	B3GAT3	O94766	335 aa		13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	PDIA4	P13667	645 aa	Known RBP	13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	IGFBP6	P24592	240 aa	Predicted RBP	13.56	□□□□□ -0.24
STRN4-223	ENST00000602223	SOX4	Q06945	474 aa	Predicted RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms