RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 CHST7Q9NS84 486 aa11.23□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PDRG1Q9NUG6 133 aa11.23□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 GMEB2Q9UKD1 530 aa11.23□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 FBXL21Q9UKT6 434 aa11.23□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 USP20Q9Y2K6 914 aa11.23□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CLUHO75153 1309 aa11.23□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 COL4A2P08572 1712 aa11.23□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PDCD11Q14690 1871 aaKnown RBP11.23□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CCDC195A0A1B0GUA6 201 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 POTEMA6NI47 508 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 STK25O00506 426 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 SEC24BO95487 1268 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 URODP06132 367 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CFHP08603 1231 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 GCFC2P16383 781 aaKnown RBP11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 ARL2P36404 184 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 GLUD2P49448 558 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 RTP2Q5QGT7 225 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 FUT10Q6P4F1 479 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PRSS55Q6UWB4 352 aaPredicted RBP11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 TPH2Q8IWU9 490 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 MAML2Q8IZL2 1156 aaPredicted RBP11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 FAM177A1Q8N128 213 aaPredicted RBP11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 NECAB1Q8N987 351 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 GLIS3Q8NEA6 775 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 GATA6Q92908 595 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 HSD17B14Q9BPX1 270 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CSRNP2Q9H175 543 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 TMEM60Q9H2L4 133 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 ZSWIM4Q9H7M6 989 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 WDR6Q9NNW5 1121 aaKnown RBP11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 KLK14Q9P0G3 267 aa11.22□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 INO80B-WBP1J3KQ70 363 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 ADAM12O43184 909 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 EPB41L2O43491 1005 aaKnown RBP11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 TGM5O43548 720 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 ERLIN2O94905 339 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 LYPLA2O95372 231 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 NPTXRO95502 500 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 GLUD1P00367 558 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 RARRES1P49788 294 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 FOSBP53539 338 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 BMS1Q14692 1282 aaKnown RBP11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 NAB2Q15742 525 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CCDC6Q16204 474 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 LILRA6Q6PI73 481 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 POTEHQ6S545 545 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 OTOP3Q7RTS5 596 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PALB2Q86YC2 1186 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 TMEM87AQ8NBN3 555 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PIGOQ8TEQ8 1089 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 HASPINQ8TF76 798 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 TCP11Q8WWU5 503 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 BSNDQ8WZ55 320 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 ACSF2Q96CM8 615 aaPredicted RBP11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 FAM193BQ96PV7 902 aaPredicted RBP11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 RPP25Q9BUL9 199 aaKnown RBP11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 DLGAP2Q9P1A6 1054 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 KANSL3Q9P2N6 904 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PPME1Q9Y570 386 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PCDHGA2Q9Y5H1 932 aa11.21□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PTGESO14684 152 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 GAS2O43903 313 aaKnown RBP11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 GDF9O60383 454 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 JAK2O60674 1132 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 USO1O60763 962 aaKnown RBP11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 LRRN2O75325 713 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 ADH1AP07327 375 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 DCNP07585 359 aaKnown RBP11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 SPATA31C1P0DKV0 1188 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 GLULP15104 373 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 RFX1P22670 979 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 GBP2P32456 591 aaPredicted RBP11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 NTHL1P78549 312 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 ME3Q16798 604 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 ZNF528Q3MIS6 628 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 IL31Q6EBC2 164 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 NOTUMQ6P988 496 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 TMEFF1Q8IYR6 380 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 SLC44A3Q8N4M1 653 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 SMG7Q92540 1137 aaKnown RBP11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 MTMR9Q96QG7 549 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 RHOBTB2Q9BYZ6 727 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 NT5C3AQ9H0P0 336 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 POLR3FQ9H1D9 316 aaPredicted RBP11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 EPS15L1Q9UBC2 864 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 ORC3Q9UBD5 711 aaPredicted RBP11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 CA14Q9ULX7 337 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 APC2O95996 2303 aa11.2□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 SDK1Q7Z5N4 2213 aa11.19□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 CARNS1A5YM72 827 aa11.19□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 SPDYE4A6NLX3 237 aa11.19□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 BTBD18B2RXH4 712 aa11.19□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 ASAP2O43150 1006 aa11.19□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 DKC1O60832 514 aaKnown RBP eCLIP11.19□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 MED24O75448 989 aa11.19□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 KIF4AO95239 1232 aa11.19□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 PLA2G2AP14555 144 aa11.19□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 SPINK2P20155 84 aa11.19□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 AXLP30530 894 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms