RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 DDX3YO15523 660 aaKnown RBP12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 NR1D1P20393 614 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 RRM1P23921 792 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 TFAMQ00059 246 aaKnown RBP12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 ORC1Q13415 861 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 BRDTQ58F21 947 aaPredicted RBP12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 XKR3Q5GH77 459 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 ALS2CLQ60I27 953 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 CATSPERGQ6ZRH7 1159 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 ZNF572Q7Z3I7 529 aaPredicted RBP12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 APOBEC3FQ8IUX4 373 aaKnown RBP12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 TMEM130Q8N3G9 435 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 WHAMMQ8TF30 809 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 ACSF2Q96CM8 615 aaPredicted RBP12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 ISCUQ9H1K1 167 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 ASIC3Q9UHC3 531 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 NOVA2Q9UNW9 492 aaKnown RBP12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 TTLL13PA6NNM8 815 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 THAP12O43422 761 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 SUPT20HL2P0C7V6 817 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 NSFP46459 744 aaKnown RBP12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 SUPT20HL1Q3ZLR7 823 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 GJC2Q5T442 439 aaPredicted RBP12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 OTUD6BQ8N6M0 293 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 CYFIP2Q96F07 1278 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 UMODL1Q5DID0 1318 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 CCDC188H7C350 402 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 FGFR4P22455 802 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 MAP3K10Q02779 954 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 ADCY1Q08828 1119 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 EAPPQ56P03 285 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 CCDC137Q6PK04 289 aaKnown RBP12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 TAX1BP1Q86VP1 789 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 COPS5Q92905 334 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 LRRC45Q96CN5 670 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 SELENOSQ9BQE4 189 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 INO80BQ9C086 356 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 AZI2Q9H6S1 392 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 BTBD7Q9P203 1132 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 NXF1Q9UBU9 619 aaKnown RBP12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 PI4K2BG5E9Z4 385 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 IRF6O14896 467 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 SCP2P22307 547 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 MAGEA9P43362 315 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 OR5B17Q8NGF7 314 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 FBXO25Q8TCJ0 367 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 HELQQ8TDG4 1101 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 CAVIN3Q969G5 261 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 HAUS1Q96CS2 278 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 SCLT1Q96NL6 688 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 STXBP5LQ9Y2K9 1186 aa12.35□□□□□ -0.43
ARHGEF1-220ENST00000600274 A0A0A6YYK5 440 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 DKC1O60832 514 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■□□□ 12.2
ARHGEF1-220ENST00000600274 OATP04181 439 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 UBA1P22314 1058 aaKnown RBP12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 TCF7P36402 384 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 TNFSF9P41273 254 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 PPATQ06203 517 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 FAM182AQ5T1J6 154 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 ICE2Q659A1 982 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 TAS1R3Q7RTX0 852 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 JAMLQ86YT9 394 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 RHPN2Q8IUC4 686 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 FAM71AQ8IYT1 594 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 ZNF516Q92618 1163 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 CDHR1Q96JP9 859 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 LRRC4CQ9HCJ2 640 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 GPRC5DQ9NZD1 345 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 INTUQ9ULD6 942 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 PTPRJQ12913 1337 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 BTNL10A8MVZ5 291 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 E7EVH7 732 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 PPFIA4O75335 1185 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 CD19P15391 556 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 GLRA2P23416 452 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 STAT5BP51692 787 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 NFIL3Q16649 462 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 TMEM63BQ5T3F8 832 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 ABHD15Q6UXT9 468 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 SLFN11Q7Z7L1 901 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 CEP57Q86XR8 500 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 RNF149Q8NC42 400 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 OLIG1Q8TAK6 271 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 DCPSQ96C86 337 aaKnown RBP12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 MRRFQ96E11 262 aaKnown RBP12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 NAP1L3Q99457 506 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 ZSWIM1Q9BR11 485 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 NOCTQ9UK39 431 aaKnown RBP12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 CEP350Q5VT06 3117 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 DCDC2CA8MYV0 355 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 MYO1FO00160 1098 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 O00370 1275 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 LYPLA2O95372 231 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 CDR2Q01850 454 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 TDRD10Q5VZ19 366 aaKnown RBP12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 CAPN12Q6ZSI9 719 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 PRUNE1Q86TP1 453 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 FMNL3Q8IVF7 1028 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 FBXO16Q8IX29 292 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms