RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 MRPL4Q9BYD3 311 aaKnown RBP15.1■□□□□ 0.01
SCAF1-203ENST00000598359 TMEM134Q9H6X4 195 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 RXFP1Q9HBX9 757 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 PTPRHQ9HD43 1115 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 CACNA1AO00555 2505 aa15.1■□□□□ 0.01
SCAF1-203ENST00000598359 ABLIM1O14639 778 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 RFPL2O75678 378 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 ADH1AP07327 375 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 PLCG1P19174 1290 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
SCAF1-203ENST00000598359 ZXDAP98168 799 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 CEBPZQ03701 1054 aaKnown RBP15.09■□□□□ 0.01
SCAF1-203ENST00000598359 MCM6Q14566 821 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 USP41Q3LFD5 358 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 ATAT1Q5SQI0 421 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 USP49Q70CQ1 688 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 GPBP1Q86WP2 473 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 CEP57Q86XR8 500 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 TMEM161BQ8NDZ6 487 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 RASSF8Q8NHQ8 419 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 CALML4Q96GE6 196 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 AK8Q96MA6 479 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 MFSD14AQ96MC6 490 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 NECTIN4Q96NY8 510 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 PPP1R10Q96QC0 940 aaKnown RBP15.09■□□□□ 0.01
SCAF1-203ENST00000598359 TCHPQ9BT92 498 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 TIPINQ9BVW5 301 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 SFXN1Q9H9B4 322 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 BLOC1S4Q9NUP1 217 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 ANKFY1Q9P2R3 1169 aa15.09■□□□□ 0.01
SCAF1-203ENST00000598359 SF3B1O75533 1304 aaKnown RBP eCLIP15.09■□□□□ 0.012e-6■■■■■ 43.1
SCAF1-203ENST00000598359 I3L4J1 428 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 MEFVO15553 781 aaPredicted RBP15.08■□□□□ 0
SCAF1-203ENST00000598359 GLUD1P00367 558 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 MAPTP10636 758 aaKnown RBP15.08■□□□□ 0
SCAF1-203ENST00000598359 PDCP20941 246 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 PROZP22891 400 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 LONP1P36776 959 aaKnown RBP15.08■□□□□ 0
SCAF1-203ENST00000598359 GRM5P41594 1212 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 CLCNKBP51801 687 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 SOX4Q06945 474 aaPredicted RBP15.08■□□□□ 0
SCAF1-203ENST00000598359 PTPAQ15257 358 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 FAM171A1Q5VUB5 890 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 MPZL3Q6UWV2 235 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 GPR149Q86SP6 731 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 TMEM130Q8N3G9 435 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 SPIRE2Q8WWL2 714 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 EPSTI1Q96J88 318 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 ZMAT2Q96NC0 199 aaKnown RBP15.08■□□□□ 0
SCAF1-203ENST00000598359 REEP2Q9BRK0 252 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 NTPCRQ9BSD7 190 aaKnown RBP15.08■□□□□ 0
SCAF1-203ENST00000598359 CCDC94Q9BW85 323 aaPredicted RBP15.08■□□□□ 0
SCAF1-203ENST00000598359 SMOC2Q9H3U7 446 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 C17orf75Q9HAS0 396 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 SSX2IPQ9Y2D8 614 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 NR2E1Q9Y466 385 aa15.08■□□□□ 0
SCAF1-203ENST00000598359 SMIM28A0A1B0GU29 152 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 CCDC195A0A1B0GUA6 201 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 ADAM12O43184 909 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 TGM5O43548 720 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 BMP15O95972 392 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 ASGR2P07307 311 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 MCF2P10911 925 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 STRN3Q13033 797 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 PTPN21Q16825 1174 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 CD300LGQ6UXG3 332 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 TRIM67Q6ZTA4 783 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 APBB1IPQ7Z5R6 666 aaPredicted RBP15.07■□□□□ 0
SCAF1-203ENST00000598359 C3orf58Q8NDZ4 430 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 RAD54LQ92698 747 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 CLIC6Q96NY7 704 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 TTPALQ9BTX7 342 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 LIMD1Q9UGP4 676 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 MTMR6Q9Y217 621 aa15.07■□□□□ 0
SCAF1-203ENST00000598359 TMEM221A6NGB7 291 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 K7ELQ4 463 aaPredicted RBP15.06■□□□□ 0
SCAF1-203ENST00000598359 M0R296 226 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 B3GAT3O94766 335 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 BRCC3P46736 316 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 SMTNP53814 917 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 YARSP54577 528 aaKnown RBP15.06■□□□□ 0
SCAF1-203ENST00000598359 ALKAL1Q6UXT8 129 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 TDRD5Q8NAT2 981 aaKnown RBP15.06■□□□□ 0
SCAF1-203ENST00000598359 KREMEN2Q8NCW0 462 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 LNX1Q8TBB1 728 aaPredicted RBP15.06■□□□□ 0
SCAF1-203ENST00000598359 C18orf25Q96B23 403 aaPredicted RBP15.06■□□□□ 0
SCAF1-203ENST00000598359 CLSTN3Q9BQT9 956 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 HAPLN2Q9GZV7 340 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 ZHX3Q9H4I2 956 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 KCND2Q9NZV8 630 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 FNIP2Q9P278 1114 aa15.06■□□□□ 0
SCAF1-203ENST00000598359 FBXO2Q9UK22 296 aaPredicted RBP15.06■□□□□ 0
SCAF1-203ENST00000598359 C2orf16Q68DN1 1984 aa15.05■□□□□ 0
SCAF1-203ENST00000598359 TOM1L1O75674 476 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 FAM13AO94988 1023 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 KRT18P05783 430 aaKnown RBP15.05■□□□□ -0
SCAF1-203ENST00000598359 MATR3P43243 847 aaKnown RBP eCLIP15.05■□□□□ -0
SCAF1-203ENST00000598359 NCKAP1LP55160 1127 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 FOXK2Q01167 660 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 NOLC1Q14978 699 aaKnown RBP eCLIP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms