RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 SLC35G2Q8TBE7 412 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 POMGNT1Q8WZA1 660 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 MFSD14AQ96MC6 490 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 FBXL18Q96ME1 805 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 CBWD1Q9BRT8 395 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 FAM129AQ9BZQ8 928 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 SUGCTQ9HAC7 445 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 EPB41L5Q9HCM4 733 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 POLD4Q9HCU8 107 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 GOLGA6AQ9NYA3 693 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 CYP39A1Q9NYL5 469 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 UVRAGQ9P2Y5 699 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 DMGDHQ9UI17 866 aaKnown RBP11.42□□□□□ -0.58
ZNF540-208ENST00000589857 PRDM4Q9UKN5 801 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 UTP11Q9Y3A2 253 aaKnown RBP11.42□□□□□ -0.58
ZNF540-208ENST00000589857 NOC2LQ9Y3T9 749 aaKnown RBP11.42□□□□□ -0.58
ZNF540-208ENST00000589857 ZNF233A6NK53 670 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 FOXN3O00409 490 aaPredicted RBP11.41□□□□□ -0.58
ZNF540-208ENST00000589857 SOX1O00570 391 aaPredicted RBP11.41□□□□□ -0.58
ZNF540-208ENST00000589857 HNRNPDLO14979 420 aaKnown RBP11.41□□□□□ -0.58
ZNF540-208ENST00000589857 EXTL3O43909 919 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 MYBL1P10243 752 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 CNGA1P29973 690 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 DNA2P51530 1060 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 AP3M2P53677 418 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 POLGP54098 1239 aaPredicted RBP11.41□□□□□ -0.58
ZNF540-208ENST00000589857 ACTR2P61160 394 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 PRKCEQ02156 737 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 GCNT1Q02742 428 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 CYP24A1Q07973 514 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 DHX34Q14147 1143 aaKnown RBP11.41□□□□□ -0.58
ZNF540-208ENST00000589857 UGCGQ16739 394 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 WDR44Q5JSH3 913 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 SEL1L2Q5TEA6 688 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 PHLDB3Q6NSJ2 640 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 ANO5Q75V66 913 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 CD302Q8IX05 232 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 FAM71AQ8IYT1 594 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 METTL13Q8N6R0 699 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 PARD3BQ8TEW8 1205 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 GTF3C2Q8WUA4 911 aaPredicted RBP11.41□□□□□ -0.58
ZNF540-208ENST00000589857 MAIP1Q8WWC4 291 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 SOCS4Q8WXH5 440 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 SHC3Q92529 594 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 MS4A14Q96JA4 679 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 ZFP91Q96JP5 570 aaPredicted RBP11.41□□□□□ -0.58
ZNF540-208ENST00000589857 FAM167AQ96KS9 214 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 SH3GL2Q99962 352 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 GPR88Q9GZN0 384 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 TMEM117Q9H0C3 514 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 WNT8AQ9H1J5 351 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 FAM204AQ9H8W3 233 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 CYP26B1Q9NR63 512 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 C1orf112Q9NSG2 853 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 NRBP2Q9NSY0 501 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 CTTNBP2NLQ9P2B4 639 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 PARP2Q9UGN5 583 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 SEPT9Q9UHD8 586 aaPredicted RBP11.41□□□□□ -0.58
ZNF540-208ENST00000589857 LCMT1Q9UIC8 334 aa11.41□□□□□ -0.58
ZNF540-208ENST00000589857 AJAP1Q9UKB5 411 aaPredicted RBP11.41□□□□□ -0.58
ZNF540-208ENST00000589857 ZNF214Q9UL59 606 aaPredicted RBP11.41□□□□□ -0.58
ZNF540-208ENST00000589857 GAS2O43903 313 aaKnown RBP11.4□□□□□ -0.58
ZNF540-208ENST00000589857 BUB1BO60566 1050 aaPredicted RBP11.4□□□□□ -0.58
ZNF540-208ENST00000589857 ATP9AO75110 1047 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 ZMYND10O75800 440 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 GGCXP38435 758 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 NAMPTP43490 491 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 LIG4P49917 911 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 CDR1P51861 262 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 SLC7A5Q01650 507 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 PPP3CAQ08209 521 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 NEDD9Q14511 834 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 PLA2G4FQ68DD2 849 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 SWSAP1Q6NVH7 229 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 KCNV1Q6PIU1 500 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 ABHD15Q6UXT9 468 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 CROCCP2Q86T23 111 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 KLHL7Q8IXQ5 586 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 RPUSD2Q8IZ73 545 aaKnown RBP11.4□□□□□ -0.58
ZNF540-208ENST00000589857 PPM1KQ8N3J5 372 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 SLC7A3Q8WY07 619 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 IFT81Q8WYA0 676 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 FNBP1Q96RU3 617 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 LBHD1Q9BQE6 289 aaPredicted RBP11.4□□□□□ -0.58
ZNF540-208ENST00000589857 JPH2Q9BR39 696 aaPredicted RBP11.4□□□□□ -0.58
ZNF540-208ENST00000589857 POLR3FQ9H1D9 316 aaPredicted RBP11.4□□□□□ -0.58
ZNF540-208ENST00000589857 BCAS3Q9H6U6 928 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 RAB20Q9NX57 234 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 PRKAG2Q9UGJ0 569 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 GTF3C4Q9UKN8 822 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 MTUS1Q9ULD2 1270 aa11.4□□□□□ -0.58
ZNF540-208ENST00000589857 ZMYND8Q9ULU4 1186 aaPredicted RBP11.4□□□□□ -0.58
ZNF540-208ENST00000589857 SART1O43290 800 aaKnown RBP11.39□□□□□ -0.59
ZNF540-208ENST00000589857 RAD51CO43502 376 aa11.39□□□□□ -0.59
ZNF540-208ENST00000589857 LRRN2O75325 713 aa11.39□□□□□ -0.59
ZNF540-208ENST00000589857 SYF2O95926 243 aaKnown RBP11.39□□□□□ -0.59
ZNF540-208ENST00000589857 PIGRP01833 764 aa11.39□□□□□ -0.59
ZNF540-208ENST00000589857 FTLP02792 175 aaPredicted RBP11.39□□□□□ -0.59
ZNF540-208ENST00000589857 OATP04181 439 aa11.39□□□□□ -0.59
ZNF540-208ENST00000589857 MYBL2P10244 700 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms