RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 NOLC1Q14978 699 aaKnown RBP eCLIP18.2■□□□□ 0.5
NFIC-208ENST00000589537 KARSQ15046 597 aaKnown RBP18.2■□□□□ 0.5
NFIC-208ENST00000589537 ARSHQ5FYA8 562 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 XKR4Q5GH76 650 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 C15orf39Q6ZRI6 1047 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 TAS1R1Q7RTX1 841 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 HSCBQ8IWL3 235 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 CMASQ8NFW8 434 aaPredicted RBP18.2■□□□□ 0.5
NFIC-208ENST00000589537 ACAP3Q96P50 834 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 PPP1R10Q96QC0 940 aaKnown RBP18.2■□□□□ 0.5
NFIC-208ENST00000589537 REEP2Q9BRK0 252 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 GPR62Q9BZJ7 368 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 PLEKHA4Q9H4M7 779 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 PARVGQ9HBI0 331 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 BLOC1S4Q9NUP1 217 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 STK17AQ9UEE5 414 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 MUTYHQ9UIF7 546 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
NFIC-208ENST00000589537 F8W810 466 aa18.19■□□□□ 0.5
NFIC-208ENST00000589537 TBCAO75347 108 aaKnown RBP18.19■□□□□ 0.5
NFIC-208ENST00000589537 KIF4AO95239 1232 aa18.19■□□□□ 0.5
NFIC-208ENST00000589537 GRIN1Q05586 938 aa18.19■□□□□ 0.5
NFIC-208ENST00000589537 KYAT1Q16773 422 aa18.19■□□□□ 0.5
NFIC-208ENST00000589537 RIN2Q8WYP3 895 aaPredicted RBP18.19■□□□□ 0.5
NFIC-208ENST00000589537 DDX27Q96GQ7 796 aaKnown RBP18.19■□□□□ 0.5
NFIC-208ENST00000589537 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
NFIC-208ENST00000589537 POMKQ9H5K3 350 aa18.19■□□□□ 0.5
NFIC-208ENST00000589537 C11orf16Q9NQ32 467 aa18.19■□□□□ 0.5
NFIC-208ENST00000589537 FBXO2Q9UK22 296 aaPredicted RBP18.19■□□□□ 0.5
NFIC-208ENST00000589537 USTQ9Y2C2 406 aa18.19■□□□□ 0.5
NFIC-208ENST00000589537 SMIM28A0A1B0GU29 152 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 ABLIM1O14639 778 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 CLDN3O15551 220 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 TRAPPC3O43617 180 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 KCNE1P15382 129 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 DDIT3P35638 169 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 MCL1Q07820 350 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 DCLRE1AQ6PJP8 1040 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 HAUS6Q7Z4H7 955 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 GPR149Q86SP6 731 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 ZBTB33Q86T24 672 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 PIK3R5Q8WYR1 880 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 EDAQ92838 391 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 SNX27Q96L92 541 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 PAAF1Q9BRP4 392 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 MAN1C1Q9NR34 630 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 HCN4Q9Y3Q4 1203 aa18.18■□□□□ 0.5
NFIC-208ENST00000589537 NPHP3-ACAD11A0A0J9YXS1 232 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 B3GAT3O94766 335 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 MARCKSP29966 332 aaPredicted RBP18.17■□□□□ 0.5
NFIC-208ENST00000589537 DHX8Q14562 1220 aaKnown RBP18.17■□□□□ 0.5
NFIC-208ENST00000589537 MCM6Q14566 821 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 SLC39A14Q15043 492 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 GLRA4Q5JXX5 417 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 FAM171A1Q5VUB5 890 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 ALKAL1Q6UXT8 129 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.17■□□□□ 0.5
NFIC-208ENST00000589537 CCDC149Q6ZUS6 474 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 MYCT1Q8N699 235 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 C12orf76Q8N812 135 aaPredicted RBP18.17■□□□□ 0.5
NFIC-208ENST00000589537 CEP120Q8N960 986 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 KRI1Q8N9T8 703 aaKnown RBP18.17■□□□□ 0.5
NFIC-208ENST00000589537 BICD1Q96G01 975 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 CNTN3Q9P232 1028 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 ANKFY1Q9P2R3 1169 aa18.17■□□□□ 0.5
NFIC-208ENST00000589537 ARIH1Q9Y4X5 557 aaPredicted RBP18.17■□□□□ 0.5
NFIC-208ENST00000589537 K7ENM7 598 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 TRAK2O60296 914 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 PAPLNO95428 1278 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 PIGRP01833 764 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 HSP90AA1P07900 732 aaKnown RBP18.16■□□□□ 0.5
NFIC-208ENST00000589537 LIG4P49917 911 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 OSTNP61366 133 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
NFIC-208ENST00000589537 UPP1Q16831 310 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 RTP2Q5QGT7 225 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 RRAGBQ5VZM2 374 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 TMC5Q6UXY8 1006 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 CCDC73Q6ZRK6 1079 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 PLCD3Q8N3E9 789 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 TDRD5Q8NAT2 981 aaKnown RBP18.16■□□□□ 0.5
NFIC-208ENST00000589537 HASPINQ8TF76 798 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 RABGGTAQ92696 567 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 EPSTI1Q96J88 318 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 ZNF396Q96N95 335 aaPredicted RBP18.16■□□□□ 0.5
NFIC-208ENST00000589537 PLEKHA5Q9HAU0 1116 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 TSHZ2Q9NRE2 1034 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 FOXD4L1Q9NU39 408 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 ZDHHC7Q9NXF8 308 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 MYH11P35749 1972 aa18.16■□□□□ 0.5
NFIC-208ENST00000589537 C5orf42Q9H799 3197 aa18.15■□□□□ 0.5
NFIC-208ENST00000589537 FAM86C2PA6NEL3 165 aa18.15■□□□□ 0.5
NFIC-208ENST00000589537 HNRNPDLO14979 420 aaKnown RBP18.15■□□□□ 0.5
NFIC-208ENST00000589537 HARSP12081 509 aaKnown RBP18.15■□□□□ 0.5
NFIC-208ENST00000589537 RPL9P32969 192 aaKnown RBP18.15■□□□□ 0.5
NFIC-208ENST00000589537 MATR3P43243 847 aaKnown RBP eCLIP18.15■□□□□ 0.5
NFIC-208ENST00000589537 NASPP49321 788 aaPredicted RBP18.15■□□□□ 0.5
NFIC-208ENST00000589537 CLCNKBP51801 687 aa18.15■□□□□ 0.5
NFIC-208ENST00000589537 CEBPZQ03701 1054 aaKnown RBP18.15■□□□□ 0.5
NFIC-208ENST00000589537 PSMD5Q16401 504 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms