RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 PJA2O43164 708 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 ZRANB2O95218 330 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 GJB6O95452 261 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 MYZAPP0CAP1 466 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 CYP11B1P15538 503 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 GLRA2P23416 452 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 ADCY8P40145 1251 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 GNGT1P63211 74 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 DMTNQ08495 405 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 PPFIA1Q13136 1202 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 DRP2Q13474 957 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 MMS22LQ6ZRQ5 1243 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 RBBP8NLQ8NC74 664 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 TCP11Q8WWU5 503 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 MED4Q9NPJ6 270 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 MYH7BA7E2Y1 1941 aa13.33□□□□□ -0.28
SMARCA4-208ENST00000585799 VTNP04004 478 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 ZNF286BP0CG31 522 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 RDXP35241 583 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 OAZ1P54368 228 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 TRADDQ15628 312 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 ZSCAN26Q16670 478 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 ZBTB41Q5SVQ8 909 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 LLGL2Q6P1M3 1020 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 DNAJC24Q6P3W2 148 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 PAIP2Q9BPZ3 127 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 XPNPEP1Q9NQW7 623 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 CALCOCO1Q9P1Z2 691 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 SPATA31C2B4DYI2 1134 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 KRT14P02533 472 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 GPC3P51654 580 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 RWDD2BP57060 319 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 ADCY1Q08828 1119 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 LBX2Q6XYB7 198 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 AFG1LQ8WV93 481 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 UPF1Q92900 1129 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 JPH2Q9BR39 696 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 SIX2Q9NPC8 291 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 FGFR4P22455 802 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 DUOXA2Q1HG44 320 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 ZNF667Q5HYK9 610 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 CATSPER4Q7RTX7 472 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 MMGT1Q8N4V1 131 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 ACSF2Q96CM8 615 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 CYFIP2Q96F07 1278 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 ZBED3Q96IU2 234 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 PPANQ9NQ55 473 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 PARP2Q9UGN5 583 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 ZNF148Q9UQR1 794 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 ECM29Q5VYK3 1845 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 SBF2Q86WG5 1849 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 ZMYM2Q9UBW7 1377 aa13.32□□□□□ -0.28
SMARCA4-208ENST00000585799 KIAA0754O94854 1291 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 SLC25A27O95847 323 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 METTL7BQ6UX53 244 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 GPRC5AQ8NFJ5 357 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 PLAAQ9Y263 795 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 PPP2R3BQ9Y5P8 575 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 LRRD1A4D1F6 860 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 NNTQ13423 1086 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 DAB2IPQ5VWQ8 1189 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 EMBQ6PCB8 327 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 ABHD15Q6UXT9 468 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 DNERQ8NFT8 737 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 SCFD2Q8WU76 684 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 HEXIM2Q96MH2 286 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 ZWILCHQ9H900 591 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 KCNK9Q9NPC2 374 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 HPCAL4Q9UM19 191 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 TLR3O15455 904 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 CELF2O95319 508 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 RFX1P22670 979 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 RRM1P23921 792 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 BRD2P25440 801 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 ADSSP30520 456 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 CDO1Q16878 200 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 ERICH1Q86X53 443 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 RIOX2Q8IUF8 465 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 CEP120Q8N960 986 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 CASKIN2Q8WXE0 1202 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 PORCNQ9H237 461 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 SMARCAD1Q9H4L7 1026 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 C17orf75Q9HAS0 396 aa13.31□□□□□ -0.28
SMARCA4-208ENST00000585799 SYNJ2BP-COX16A0A087WUM0 186 aa13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 TARSL2A2RTX5 802 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 SOWAHBA6NEL2 793 aa13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 MAPTP10636 758 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 TNFSF9P41273 254 aa13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 MARCKSL1P49006 195 aa13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 ATF7IP2Q5U623 682 aa13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 KRT35Q92764 455 aa13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 KREMEN1Q96MU8 473 aa13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 COX16Q9P0S2 106 aa13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 PCSK1NQ9UHG2 260 aa13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 ADGRA3Q8IWK6 1321 aa13.3□□□□□ -0.28
SMARCA4-208ENST00000585799 CCDC188H7C350 402 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms