RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 MAN1C1Q9NR34 630 aa19.77■□□□□ 0.76
SRSF1-208ENST00000584773 MAPTP10636 758 aaKnown RBP19.76■□□□□ 0.75
SRSF1-208ENST00000584773 GRM5P41594 1212 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 USP41Q3LFD5 358 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 PALB2Q86YC2 1186 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 TMEM130Q8N3G9 435 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 RASSF8Q8NHQ8 419 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 RAD54LQ92698 747 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 INTS4Q96HW7 963 aaKnown RBP19.76■□□□□ 0.75
SRSF1-208ENST00000584773 NTPCRQ9BSD7 190 aaKnown RBP19.76■□□□□ 0.75
SRSF1-208ENST00000584773 SFXN1Q9H9B4 322 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 C17orf75Q9HAS0 396 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 ANKFY1Q9P2R3 1169 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 FBXO2Q9UK22 296 aaPredicted RBP19.76■□□□□ 0.75
SRSF1-208ENST00000584773 RBM19Q9Y4C8 960 aaKnown RBP19.76■□□□□ 0.75
SRSF1-208ENST00000584773 ADH1AP07327 375 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 CLCNKBP51801 687 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 SOX4Q06945 474 aaPredicted RBP19.76■□□□□ 0.75
SRSF1-208ENST00000584773 FAM171A1Q5VUB5 890 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 MPZL3Q6UWV2 235 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 CEP57Q86XR8 500 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 ZMAT2Q96NC0 199 aaKnown RBP19.76■□□□□ 0.75
SRSF1-208ENST00000584773 TCHPQ9BT92 498 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 CCDC94Q9BW85 323 aaPredicted RBP19.76■□□□□ 0.75
SRSF1-208ENST00000584773 HAPLN2Q9GZV7 340 aa19.76■□□□□ 0.75
SRSF1-208ENST00000584773 MYO10Q9HD67 2058 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 MYH15Q9Y2K3 1946 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 SF3B1O75533 1304 aaKnown RBP eCLIP19.75■□□□□ 0.755e-6■■■□□ 15.3
SRSF1-208ENST00000584773 SMIM28A0A1B0GU29 152 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 PRR33A8MZF0 331 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 RFPL2O75678 378 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 GLUD1P00367 558 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 MCF2P10911 925 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 MTHFRP42898 656 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 NCKAP1LP55160 1127 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 STRN3Q13033 797 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 CD300LGQ6UXG3 332 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 KCTD17Q8N5Z5 321 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 C3orf58Q8NDZ4 430 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 SNX27Q96L92 541 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 RIPOR3Q96MK2 946 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 USP28Q96RU2 1077 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 KCND2Q9NZV8 630 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 SSX2IPQ9Y2D8 614 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 GTF3C3Q9Y5Q9 886 aa19.75■□□□□ 0.75
SRSF1-208ENST00000584773 MTCL1Q9Y4B5 1905 aaKnown RBP19.74■□□□□ 0.75
SRSF1-208ENST00000584773 PDCD11Q14690 1871 aaKnown RBP19.74■□□□□ 0.75
SRSF1-208ENST00000584773 I3L4J1 428 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 SLC26A4O43511 780 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 TGM5O43548 720 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 SMTNP53814 917 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 ATAT1Q5SQI0 421 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 ALKAL1Q6UXT8 129 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 HFE2Q6ZVN8 426 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 APBB1IPQ7Z5R6 666 aaPredicted RBP19.74■□□□□ 0.75
SRSF1-208ENST00000584773 GPR149Q86SP6 731 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 EDAQ92838 391 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 NECTIN4Q96NY8 510 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 CCSER1Q9C0I3 900 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 SMOC2Q9H3U7 446 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 ZHX3Q9H4I2 956 aa19.74■□□□□ 0.75
SRSF1-208ENST00000584773 ADAM12O43184 909 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 STX6O43752 255 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 FAM13AO94988 1023 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 BRD1O95696 1058 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 BRCC3P46736 316 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 YARSP54577 528 aaKnown RBP19.73■□□□□ 0.75
SRSF1-208ENST00000584773 ZXDAP98168 799 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 NOLC1Q14978 699 aaKnown RBP eCLIP19.73■□□□□ 0.754e-11■□□□□ 10.2
SRSF1-208ENST00000584773 XKR4Q5GH76 650 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 FOXD4L5Q5VV16 416 aaPredicted RBP19.73■□□□□ 0.75
SRSF1-208ENST00000584773 HAUS6Q7Z4H7 955 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 MYCT1Q8N699 235 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 LNX1Q8TBB1 728 aaPredicted RBP19.73■□□□□ 0.75
SRSF1-208ENST00000584773 FOXD4L4Q8WXT5 416 aaPredicted RBP19.73■□□□□ 0.75
SRSF1-208ENST00000584773 LARP4BQ92615 738 aaKnown RBP19.73■□□□□ 0.75
SRSF1-208ENST00000584773 C18orf25Q96B23 403 aaPredicted RBP19.73■□□□□ 0.75
SRSF1-208ENST00000584773 ACAP3Q96P50 834 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 TTPALQ9BTX7 342 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 ODF2LQ9ULJ1 636 aa19.73■□□□□ 0.75
SRSF1-208ENST00000584773 DOCK6Q96HP0 2047 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 CCDC195A0A1B0GUA6 201 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 K7ENM7 598 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 TOM1L1O75674 476 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 B3GAT3O94766 335 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 KRT18P05783 430 aaKnown RBP19.72■□□□□ 0.75
SRSF1-208ENST00000584773 ASGR2P07307 311 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 SPAG1Q07617 926 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 PTPN21Q16825 1174 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 UPP1Q16831 310 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 BICD1Q96G01 975 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 FIZ1Q96SL8 496 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 CLSTN3Q9BQT9 956 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 FNIP2Q9P278 1114 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 LARSQ9P2J5 1176 aaKnown RBP19.72■□□□□ 0.75
SRSF1-208ENST00000584773 NR2E1Q9Y466 385 aa19.72■□□□□ 0.75
SRSF1-208ENST00000584773 SRPRBQ9Y5M8 271 aaKnown RBP19.72■□□□□ 0.75
SRSF1-208ENST00000584773 NMT1P30419 496 aaKnown RBP19.71■□□□□ 0.75
SRSF1-208ENST00000584773 TNFSF9P41273 254 aa19.71■□□□□ 0.75
SRSF1-208ENST00000584773 MATR3P43243 847 aaKnown RBP eCLIP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms