RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 TFF2Q03403 129 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 GPM6BQ13491 265 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 SPOUT1Q5T280 376 aaKnown RBP17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 EEF1DP3Q658K8 133 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 SYCP3Q8IZU3 236 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 COLGALT1Q8NBJ5 622 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 DHTKD1Q96HY7 919 aaPredicted RBP17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 KCTD10Q9H3F6 313 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 PTPRHQ9HD43 1115 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 TBC1D13Q9NVG8 400 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 INPP5FQ9Y2H2 1132 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 HES2Q9Y543 173 aa17.44■□□□□ 0.38
CSNK1D-223ENST00000584472 ARL5CA6NH57 179 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 PSMA7O14818 248 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 HNRNPDLO14979 420 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 TOM1L1O75674 476 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 CCDC192P0DO97 292 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 PROZP22891 400 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 LIG4P49917 911 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 RNASELQ05823 741 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 CENPPQ6IPU0 288 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 SLC39A4Q6P5W5 647 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 MPZL3Q6UWV2 235 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 BICD1Q96G01 975 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 ZNF558Q96NG5 402 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 GBP3Q9H0R5 595 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 HCSTQ9UBK5 93 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 DACH1Q9UI36 760 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 PLAGL2Q9UPG8 496 aa17.43■□□□□ 0.38
CSNK1D-223ENST00000584472 TISP43B9A030 160 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 ANKRD63C9JTQ0 380 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 MCF2P10911 925 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 MLH1P40692 756 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 PUS10Q3MIT2 529 aaKnown RBP17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 LEXMQ3ZCV2 418 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 ZNF568Q3ZCX4 644 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 CT47A1Q5JQC4 288 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 KLHL10Q6JEL2 608 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 KCNT2Q6UVM3 1135 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 KLHL23Q8NBE8 558 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 GAD1Q99259 594 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 APOL6Q9BWW8 343 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 CDT1Q9H211 546 aa17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 NSUN3Q9H649 340 aaKnown RBP17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 UBE2ZQ9H832 354 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-223ENST00000584472 PDXKO00764 312 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 ABLIM1O14639 778 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 ITGB1P05556 798 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 CCNE1P24864 410 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 KCNQ1P51787 676 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 PMS1P54277 932 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 ZNF445P59923 1031 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 SNRPFP62306 86 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 UBE3AQ05086 875 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 PAK1Q13153 545 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 ZCWPW2Q504Y3 356 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 C11orf57Q6ZUT1 292 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 HS2ST1Q7LGA3 356 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 NELFBQ8WX92 580 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 PABPC5Q96DU9 382 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 ZBTB45Q96K62 511 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 HAPLN2Q9GZV7 340 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 AGPAT3Q9NRZ7 376 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 CGNQ9P2M7 1197 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 CTNND2Q9UQB3 1225 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 TRAF3IP3Q9Y228 551 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 STYXL1Q9Y6J8 313 aa17.41■□□□□ 0.38
CSNK1D-223ENST00000584472 PLXNA4Q9HCM2 1894 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 GRM6O15303 877 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 ZC3H11AO75152 810 aaKnown RBP eCLIP17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 FGF18O76093 207 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 RECQL4O94761 1208 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 AKAP5P24588 427 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 ADSSP30520 456 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 GRM5P41594 1212 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 ALDH7A1P49419 539 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 AFF1P51825 1210 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 BCAR1P56945 870 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 MCL1Q07820 350 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 NOLC1Q14978 699 aaKnown RBP eCLIP17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 ANO6Q4KMQ2 910 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 SLFN12LQ6IEE8 588 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 LRSAM1Q6UWE0 723 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 THNSL1Q8IYQ7 743 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 GOLGA5Q8TBA6 731 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 SPPL3Q8TCT6 385 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 ZFP42Q96MM3 310 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 TCHPQ9BT92 498 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 DNAJC25Q9H1X3 360 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 SNTG2Q9NY99 539 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 SPG21Q9NZD8 308 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 ANKFY1Q9P2R3 1169 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 PARP2Q9UGN5 583 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 RWDD2AQ9UIY3 292 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 LZTS1Q9Y250 596 aa17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 TDRD15B5MCY1 1934 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-223ENST00000584472 TRIM49BA6NDI0 452 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 CLIC2O15247 247 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms