RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PHF7Q9BWX1 381 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-220ENST00000581707 CHST7Q9NS84 486 aa21.36■■□□□ 1.01
SREBF1-220ENST00000581707 DZANK1Q9NVP4 752 aa21.36■■□□□ 1.01
SREBF1-220ENST00000581707 ANKFY1Q9P2R3 1169 aa21.36■■□□□ 1.01
SREBF1-220ENST00000581707 TFIP11Q9UBB9 837 aaKnown RBP21.36■■□□□ 1.01
SREBF1-220ENST00000581707 CITO14578 2027 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 PI4K2BG5E9Z4 385 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 TBCAO75347 108 aaKnown RBP21.35■■□□□ 1.01
SREBF1-220ENST00000581707 HARSP12081 509 aaKnown RBP21.35■■□□□ 1.01
SREBF1-220ENST00000581707 SCP2P22307 547 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 CLCN4P51793 760 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 CBX2Q14781 532 aaPredicted RBP21.35■■□□□ 1.01
SREBF1-220ENST00000581707 USP41Q3LFD5 358 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 GLRA4Q5JXX5 417 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 CES5AQ6NT32 575 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 ALKAL1Q6UXT8 129 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 SPRYD3Q8NCJ5 442 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 LINC00301Q8NCQ3 95 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 KCNN1Q92952 543 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 BICD1Q96G01 975 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 PPP1R10Q96QC0 940 aaKnown RBP21.35■■□□□ 1.01
SREBF1-220ENST00000581707 ADAM7Q9H2U9 754 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 RXFP1Q9HBX9 757 aa21.35■■□□□ 1.01
SREBF1-220ENST00000581707 SF3B1O75533 1304 aaKnown RBP eCLIP21.34■■□□□ 1.012e-7■■■■■ 192.5
SREBF1-220ENST00000581707 SMIM28A0A1B0GU29 152 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 CLDN3O15551 220 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 TRAK2O60296 914 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 KIF4AO95239 1232 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 ZSCAN22P10073 491 aaPredicted RBP21.34■■□□□ 1.01
SREBF1-220ENST00000581707 ITIH3Q06033 890 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 NOLC1Q14978 699 aaKnown RBP eCLIP21.34■■□□□ 1.01
SREBF1-220ENST00000581707 XKR4Q5GH76 650 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 CCDC73Q6ZRK6 1079 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 GPR65Q8IYL9 337 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 C12orf76Q8N812 135 aaPredicted RBP21.34■■□□□ 1.01
SREBF1-220ENST00000581707 HASPINQ8TF76 798 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 B3GALT6Q96L58 329 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 C1QTNF1Q9BXJ1 281 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 TBX20Q9UMR3 447 aa21.34■■□□□ 1.01
SREBF1-220ENST00000581707 K7ENM7 598 aa21.33■■□□□ 1.01
SREBF1-220ENST00000581707 SPTLC2O15270 562 aa21.33■■□□□ 1.01
SREBF1-220ENST00000581707 TEX28O15482 410 aa21.33■■□□□ 1.01
SREBF1-220ENST00000581707 ADH1AP07327 375 aa21.33■■□□□ 1.01
SREBF1-220ENST00000581707 MATR3P43243 847 aaKnown RBP eCLIP21.33■■□□□ 1.01
SREBF1-220ENST00000581707 MCL1Q07820 350 aa21.33■■□□□ 1.01
SREBF1-220ENST00000581707 RARS2Q5T160 578 aaKnown RBP21.33■■□□□ 1.01
SREBF1-220ENST00000581707 SV2BQ7L1I2 683 aa21.33■■□□□ 1.01
SREBF1-220ENST00000581707 DYMQ7RTS9 669 aa21.33■■□□□ 1.01
SREBF1-220ENST00000581707 RIN2Q8WYP3 895 aaPredicted RBP21.33■■□□□ 1.01
SREBF1-220ENST00000581707 FBXL18Q96ME1 805 aa21.33■■□□□ 1.01
SREBF1-220ENST00000581707 UROC1Q96N76 676 aa21.33■■□□□ 1.01
SREBF1-220ENST00000581707 PANK2Q9BZ23 570 aa21.33■■□□□ 1.01
SREBF1-220ENST00000581707 LOC730098B7Z3J9 87 aa21.32■■□□□ 1
SREBF1-220ENST00000581707 PPP6R2O75170 966 aa21.32■■□□□ 1
SREBF1-220ENST00000581707 DCLRE1AQ6PJP8 1040 aa21.32■■□□□ 1
SREBF1-220ENST00000581707 RPGRIP1Q96KN7 1286 aa21.32■■□□□ 1
SREBF1-220ENST00000581707 SNX27Q96L92 541 aa21.32■■□□□ 1
SREBF1-220ENST00000581707 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.32■■□□□ 1
SREBF1-220ENST00000581707 SLC38A7Q9NVC3 462 aa21.32■■□□□ 1
SREBF1-220ENST00000581707 CDH22Q9UJ99 828 aa21.32■■□□□ 1
SREBF1-220ENST00000581707 MYMKA6NI61 221 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 SPDYE4A6NLX3 237 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 B3GAT3O94766 335 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 YEATS4O95619 227 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 F13A1P00488 732 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 ALADP13716 330 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 KCNE1P15382 129 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 NMT1P30419 496 aaKnown RBP21.31■■□□□ 1
SREBF1-220ENST00000581707 ABCD1P33897 745 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 STAT6P42226 847 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 LIG4P49917 911 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 CLCNKBP51801 687 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 ELAVL2Q12926 359 aaKnown RBP21.31■■□□□ 1
SREBF1-220ENST00000581707 UPP1Q16831 310 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 FOXD4L6Q3SYB3 417 aaPredicted RBP21.31■■□□□ 1
SREBF1-220ENST00000581707 SEZ6Q53EL9 994 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 FAM171A1Q5VUB5 890 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 KANK3Q6NY19 840 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 FOXD4L3Q6VB84 417 aaPredicted RBP21.31■■□□□ 1
SREBF1-220ENST00000581707 CEP57Q86XR8 500 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 RNF135Q8IUD6 432 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 DDX12PQ92771 950 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 RIPOR3Q96MK2 946 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 ZMAT2Q96NC0 199 aaKnown RBP21.31■■□□□ 1
SREBF1-220ENST00000581707 NECTIN4Q96NY8 510 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 FIZ1Q96SL8 496 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 TTPALQ9BTX7 342 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 HAPLN2Q9GZV7 340 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 GOLGA2P5Q9HBQ8 144 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 CNTN3Q9P232 1028 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 FNIP2Q9P278 1114 aa21.31■■□□□ 1
SREBF1-220ENST00000581707 A0A087X0B3 334 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 TMEM189-UBE2V1I3L0A0 370 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 HNRNPDLO14979 420 aaKnown RBP21.3■■□□□ 1
SREBF1-220ENST00000581707 GLUD1P00367 558 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 PIGRP01833 764 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 MTHFRP42898 656 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 GTF2BQ00403 316 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 CREMQ03060 361 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 SLC10A6Q3KNW5 377 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms