RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 NPEPPSP55786 919 aa21.46■■□□□ 1.03
LIMD2-209ENST00000580222 MTAPQ13126 283 aa21.46■■□□□ 1.03
LIMD2-209ENST00000580222 PKP1Q13835 747 aa21.46■■□□□ 1.03
LIMD2-209ENST00000580222 ZBTB41Q5SVQ8 909 aa21.46■■□□□ 1.03
LIMD2-209ENST00000580222 MIER3Q7Z3K6 550 aa21.46■■□□□ 1.03
LIMD2-209ENST00000580222 TMEM143Q96AN5 459 aa21.46■■□□□ 1.03
LIMD2-209ENST00000580222 TEKT3Q9BXF9 490 aa21.46■■□□□ 1.03
LIMD2-209ENST00000580222 PLA2G2FQ9BZM2 168 aa21.46■■□□□ 1.03
LIMD2-209ENST00000580222 COL4A3BPQ9Y5P4 624 aa21.46■■□□□ 1.03
LIMD2-209ENST00000580222 CEP295Q9C0D2 2601 aa21.45■■□□□ 1.02
LIMD2-209ENST00000580222 SLC30A4O14863 429 aa21.45■■□□□ 1.02
LIMD2-209ENST00000580222 CCNT1O60563 726 aaKnown RBP21.45■■□□□ 1.02
LIMD2-209ENST00000580222 GCFC2P16383 781 aaKnown RBP21.45■■□□□ 1.02
LIMD2-209ENST00000580222 FUT10Q6P4F1 479 aa21.45■■□□□ 1.02
LIMD2-209ENST00000580222 MOXD1Q6UVY6 613 aa21.45■■□□□ 1.02
LIMD2-209ENST00000580222 TPRG1Q6ZUI0 275 aa21.45■■□□□ 1.02
LIMD2-209ENST00000580222 GSTCDQ8NEC7 633 aa21.45■■□□□ 1.02
LIMD2-209ENST00000580222 ZSCAN16Q9H4T2 348 aaPredicted RBP21.45■■□□□ 1.02
LIMD2-209ENST00000580222 DOCK6Q96HP0 2047 aa21.45■■□□□ 1.02
LIMD2-209ENST00000580222 PATJQ8NI35 1801 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 CCL16O15467 120 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 ADAM12O43184 909 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 F13A1P00488 732 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 TRAPPC10P48553 1259 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 USP41Q3LFD5 358 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 RTP2Q5QGT7 225 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 TTC38Q5R3I4 469 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 ZNF687Q8N1G0 1237 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 CLSTN3Q9BQT9 956 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 HCFC1R1Q9NWW0 138 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 DDX25Q9UHL0 483 aaKnown RBP21.44■■□□□ 1.02
LIMD2-209ENST00000580222 FBXW11Q9UKB1 542 aa21.44■■□□□ 1.02
LIMD2-209ENST00000580222 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.43■■□□□ 1.02
LIMD2-209ENST00000580222 GDF9O60383 454 aa21.43■■□□□ 1.02
LIMD2-209ENST00000580222 RILPL1Q5EBL4 403 aa21.43■■□□□ 1.02
LIMD2-209ENST00000580222 PPP4R3AQ6IN85 833 aa21.43■■□□□ 1.02
LIMD2-209ENST00000580222 RSPO2Q6UXX9 243 aaPredicted RBP21.43■■□□□ 1.02
LIMD2-209ENST00000580222 SRGAP1Q7Z6B7 1085 aa21.43■■□□□ 1.02
LIMD2-209ENST00000580222 PAAF1Q9BRP4 392 aa21.43■■□□□ 1.02
LIMD2-209ENST00000580222 COLEC11Q9BWP8 271 aa21.43■■□□□ 1.02
LIMD2-209ENST00000580222 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.43■■□□□ 1.02
LIMD2-209ENST00000580222 BMP2KQ9NSY1 1161 aaPredicted RBP21.43■■□□□ 1.02
LIMD2-209ENST00000580222 WRAP73Q9P2S5 460 aaPredicted RBP21.43■■□□□ 1.02
LIMD2-209ENST00000580222 GMEB2Q9UKD1 530 aa21.43■■□□□ 1.02
LIMD2-209ENST00000580222 MYH15Q9Y2K3 1946 aa21.43■■□□□ 1.02
LIMD2-209ENST00000580222 CYP3A7-CYP3A51PA0A087WV96 503 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 CYP3A7P24462 503 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 MAGEA9P43362 315 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 RPS9P46781 194 aaKnown RBP21.42■■□□□ 1.02
LIMD2-209ENST00000580222 LAMTOR4Q0VGL1 99 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 MTSS1LQ765P7 747 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 NPAS3Q8IXF0 933 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 GPR65Q8IYL9 337 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 RDM1Q8NG50 284 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 CPB2Q96IY4 423 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 APOL6Q9BWW8 343 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 UBN1Q9NPG3 1134 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 HEBP1Q9NRV9 189 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 ADAM28Q9UKQ2 775 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 SPEGQ15772 3267 aa21.42■■□□□ 1.02
LIMD2-209ENST00000580222 WDR81Q562E7 1941 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 EML1O00423 815 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 WNT7AO00755 349 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 SLC37A4O43826 429 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 TSPAN1O60635 241 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 MCM7P33993 719 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 DDIT3P35638 169 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 NUCB2P80303 420 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 PFKPQ01813 784 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 NBR1Q14596 966 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 Q4G0T1 1027 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 POTEDQ86YR6 584 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 NETO1Q8TDF5 533 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 ING5Q8WYH8 240 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 POLIQ9UNA4 740 aa21.41■■□□□ 1.02
LIMD2-209ENST00000580222 MIA3Q5JRA6 1907 aa21.4■■□□□ 1.02
LIMD2-209ENST00000580222 NRG2O14511 850 aaPredicted RBP21.4■■□□□ 1.02
LIMD2-209ENST00000580222 NEMFO60524 1076 aa21.4■■□□□ 1.02
LIMD2-209ENST00000580222 C8AP07357 584 aa21.4■■□□□ 1.02
LIMD2-209ENST00000580222 HNRNPA1P09651 372 aaKnown RBP eCLIP21.4■■□□□ 1.02
LIMD2-209ENST00000580222 AKAP5P24588 427 aa21.4■■□□□ 1.02
LIMD2-209ENST00000580222 ORC2Q13416 577 aaPredicted RBP21.4■■□□□ 1.02
LIMD2-209ENST00000580222 ZNF174Q15697 407 aa21.4■■□□□ 1.02
LIMD2-209ENST00000580222 FAM173BQ6P4H8 233 aa21.4■■□□□ 1.02
LIMD2-209ENST00000580222 NXF3Q9H4D5 531 aaKnown RBP21.4■■□□□ 1.02
LIMD2-209ENST00000580222 DHX33Q9H6R0 707 aaKnown RBP21.4■■□□□ 1.02
LIMD2-209ENST00000580222 DNMT3BQ9UBC3 853 aaKnown RBP21.4■■□□□ 1.02
LIMD2-209ENST00000580222 ASPMQ8IZT6 3477 aa21.39■■□□□ 1.02
LIMD2-209ENST00000580222 MARCH6O60337 910 aa21.39■■□□□ 1.01
LIMD2-209ENST00000580222 HOXB3P14651 431 aaPredicted RBP21.39■■□□□ 1.01
LIMD2-209ENST00000580222 TOB1P50616 345 aaPredicted RBP21.39■■□□□ 1.01
LIMD2-209ENST00000580222 ADCY1Q08828 1119 aa21.39■■□□□ 1.01
LIMD2-209ENST00000580222 COL9A2Q14055 689 aaPredicted RBP21.39■■□□□ 1.01
LIMD2-209ENST00000580222 PPM1LQ5SGD2 360 aa21.39■■□□□ 1.01
LIMD2-209ENST00000580222 RNF149Q8NC42 400 aa21.39■■□□□ 1.01
LIMD2-209ENST00000580222 CNNM3Q8NE01 707 aa21.39■■□□□ 1.01
LIMD2-209ENST00000580222 LNX1Q8TBB1 728 aaPredicted RBP21.39■■□□□ 1.01
LIMD2-209ENST00000580222 ETNPPLQ8TBG4 499 aa21.39■■□□□ 1.01
LIMD2-209ENST00000580222 HASPINQ8TF76 798 aa21.39■■□□□ 1.01
LIMD2-209ENST00000580222 NELL2Q99435 816 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms