RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, human

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCE1-215	ENST00000578995	HDAC6	Q9UBN7	1215 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PRKAG2	Q9UGJ0	569 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NOL7	Q9UMY1	257 aa	Known RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PCDHA12	Q9UN75	941 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PCDHA10	Q9Y5I2	948 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SRPRB	Q9Y5M8	271 aa	Known RBP	4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CHD7	Q9P2D1	2997 aa		4.25	□□□□□ -1.73
SMARCE1-215	ENST00000578995	REV3L	O60673	3130 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995		A0A0U1RQG5	324 aa	Predicted RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TRIM43B	A6NCK2	446 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	KIAA0355	O15063	1070 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TREH	O43280	583 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CHMP2A	O43633	222 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PPP6R2	O75170	966 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	P4HB	P07237	508 aa	Known RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	INSRR	P14616	1297 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MUT	P22033	750 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	RPA1	P27694	616 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TEC	P42680	631 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	RARRES1	P49788	294 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SLC26A2	P50443	739 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	STAT5B	P51692	787 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PRKCE	Q02156	737 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CYP4A11	Q02928	519 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TLE2	Q04725	743 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MAPK7	Q13164	816 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	DRP2	Q13474	957 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CTTN	Q14247	550 aa	Known RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	FAM26D	Q5JW98	314 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	UTP14C	Q5TAP6	766 aa	Known RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PLA2G4F	Q68DD2	849 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ATL3	Q6DD88	541 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NCAPH2	Q6IBW4	605 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SWSAP1	Q6NVH7	229 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MIS18BP1	Q6P0N0	1132 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	RUFY4	Q6ZNE9	571 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MIER3	Q7Z3K6	550 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	DAW1	Q8N136	415 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	C12orf50	Q8NA57	414 aa	Predicted RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TMEM87A	Q8NBN3	555 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NEK9	Q8TD19	979 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	LEO1	Q8WVC0	666 aa	Predicted RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SPACA7	Q96KW9	195 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	GLT1D1	Q96MS3	346 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	IPO9	Q96P70	1041 aa	Known RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	LXN	Q9BS40	222 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NOC4L	Q9BVI4	516 aa	Known RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CCSER1	Q9C0I3	900 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CSRNP2	Q9H175	543 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TRPV6	Q9H1D0	765 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SMARCAD1	Q9H4L7	1026 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	DHX33	Q9H6R0	707 aa	Known RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TUFT1	Q9NNX1	390 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	OSGEP	Q9NPF4	335 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	STARD7	Q9NQZ5	370 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ZNF302	Q9NR11	478 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MBNL3	Q9NUK0	354 aa	Known RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TRMT13	Q9NUP7	481 aa	Known RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ERAP1	Q9NZ08	941 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	TFIP11	Q9UBB9	837 aa	Known RBP	4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	GABBR1	Q9UBS5	961 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	HPSE	Q9Y251	543 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SCN1A	P35498	2009 aa		4.24	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CDH23	Q9H251	3354 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NRCAM	Q92823	1304 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PTPRD	P23468	1912 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MTCL1	Q9Y4B5	1905 aa	Known RBP	4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995		A0A087WWV3	80 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	VWA3A	A6NCI4	1184 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NOP56	O00567	594 aa	Known RBP	4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SPTLC2	O15270	562 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SLC26A4	O43511	780 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	HBP1	O60381	514 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MAF	O75444	373 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MICAL2	O94851	1124 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	BMP15	O95972	392 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	EDN1	P05305	212 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	CYP2C9	P11712	490 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	HOXA5	P20719	270 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MARK3	P27448	753 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MARCKS	P29966	332 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	LONP1	P36776	959 aa	Known RBP	4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ANP32A	P39687	249 aa	Known RBP	4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	QARS	P47897	775 aa	Known RBP	4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	EPHB4	P54760	987 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SLC12A3	P55017	1021 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NPEPPS	P55786	919 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PSMC5	P62195	406 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	NUCB2	P80303	420 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	PTK7	Q13308	1070 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ARSH	Q5FYA8	562 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	XKR3	Q5GH77	459 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	SPECC1	Q5M775	1068 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	RESP18	Q5W5W9	173 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	MTHFD1L	Q6UB35	978 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	C16orf59	Q7L2K0	433 aa		4.23	□□□□□ -1.73
SMARCE1-215	ENST00000578995	ZSWIM9	Q86XI8	627 aa		4.23	□□□□□ -1.73

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