RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 COL12A1Q99715 3063 aa7□□□□□ -1.29
UBB-208ENST00000578706 MYH9P35579 1960 aaKnown RBP7□□□□□ -1.29
UBB-208ENST00000578706 URB1O60287 2271 aaKnown RBP6.99□□□□□ -1.29
UBB-208ENST00000578706 MYO9AB2RTY4 2548 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 H3BQV1 296 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 DDX39AO00148 427 aaKnown RBP6.99□□□□□ -1.29
UBB-208ENST00000578706 CDX4O14627 284 aaPredicted RBP6.99□□□□□ -1.29
UBB-208ENST00000578706 NRP1O14786 923 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 GAS2O43903 313 aaKnown RBP6.99□□□□□ -1.29
UBB-208ENST00000578706 ECI2O75521 394 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 CCNE2O96020 404 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 ALDH2P05091 517 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 SKIP12755 728 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 RPL17P18621 184 aaKnown RBP6.99□□□□□ -1.29
UBB-208ENST00000578706 PDIA3P30101 505 aaKnown RBP6.99□□□□□ -1.29
UBB-208ENST00000578706 HOXA6P31267 233 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 ZNF76P36508 570 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 GLUD2P49448 558 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 DSG1Q02413 1049 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 DNM1Q05193 864 aaKnown RBP6.99□□□□□ -1.29
UBB-208ENST00000578706 C19orf57Q0VDD7 668 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 SCAPQ12770 1279 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 PTGDRQ13258 359 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 CCDC183Q5T5S1 534 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 ATL3Q6DD88 541 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 TANGO2Q6ICL3 276 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 EFCAB12Q6NXP0 572 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 GLYCTKQ8IVS8 523 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 CCDC60Q8IWA6 550 aaPredicted RBP6.99□□□□□ -1.29
UBB-208ENST00000578706 NSUN7Q8NE18 718 aaKnown RBP6.99□□□□□ -1.29
UBB-208ENST00000578706 DEFB124Q8NES8 71 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 GAB3Q8WWW8 586 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 ING5Q8WYH8 240 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 FAM3CQ92520 227 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 DNASE1L2Q92874 299 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 LRIG1Q96JA1 1093 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 TMEM87BQ96K49 555 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 SCLT1Q96NL6 688 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 MTA3Q9BTC8 594 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 TRAIPQ9BWF2 469 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 LRRC2Q9BYS8 371 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 SENP2Q9HC62 589 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 CHST12Q9NRB3 414 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 VPS45Q9NRW7 570 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 CHST7Q9NS84 486 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 HCFC1R1Q9NWW0 138 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 PCDHGA5Q9Y5G8 931 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 VWA8A3KMH1 1905 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 ATMQ13315 3056 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 NCANO14594 1321 aa6.99□□□□□ -1.29
UBB-208ENST00000578706 TDRD15B5MCY1 1934 aaKnown RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 SPAARA0A1B0GVQ0 90 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 EIF4E1BA6NMX2 242 aaKnown RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 MEIS1O00470 390 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 MAN2B1O00754 1011 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 JAK2O60674 1132 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 GADD45BO75293 160 aaPredicted RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 C1RP00736 705 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 FOSP01100 380 aaPredicted RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 DARSP14868 501 aaKnown RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 PXNP49023 591 aaPredicted RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 NASPP49321 788 aaPredicted RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 GPC3P51654 580 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 CDC42EP1Q00587 391 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 RESTQ13127 1097 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 GRM2Q14416 872 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 SLC5A9Q2M3M2 681 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 FOXD4L6Q3SYB3 417 aaPredicted RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 TWF2Q6IBS0 349 aaKnown RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 FOXD4L3Q6VB84 417 aaPredicted RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 AGMOQ6ZNB7 445 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 MAP4K3Q8IVH8 894 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 NLRP7Q8WX94 980 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 FAM193BQ96PV7 902 aaPredicted RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 GDPD2Q9HCC8 539 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 NRBP2Q9NSY0 501 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 FBXW11Q9UKB1 542 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 CFAP45Q9UL16 551 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 FAN1Q9Y2M0 1017 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 PRG3Q9Y2Y8 225 aaPredicted RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 RAI2Q9Y5P3 530 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 MAFBQ9Y5Q3 323 aaPredicted RBP6.98□□□□□ -1.29
UBB-208ENST00000578706 PIAS3Q9Y6X2 628 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 ABCA7Q8IZY2 2146 aa6.98□□□□□ -1.29
UBB-208ENST00000578706 ATG2BQ96BY7 2078 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 MGAQ8IWI9 3026 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 KLF18A0A0U1RQI7 1052 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 SYCE3A1L190 88 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 GOLGA8BA8MQT2 603 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 ARNTLO00327 626 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 SH2B2O14492 632 aaPredicted RBP6.97□□□□□ -1.29
UBB-208ENST00000578706 CCL16O15467 120 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 RPP40O75818 363 aaKnown RBP6.97□□□□□ -1.29
UBB-208ENST00000578706 CDKL5O76039 1030 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 DDAH1O94760 285 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 CTDNEP1O95476 244 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 ANTXR2P58335 489 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 CCDC173Q0VFZ6 552 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 PLK5Q496M5 336 aa6.97□□□□□ -1.29
UBB-208ENST00000578706 DAB2IPQ5VWQ8 1189 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms