RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 TGM5O43548 720 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 NR1I2O75469 434 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 PLS3P13797 630 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 PLCG1P19174 1290 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 PROZP22891 400 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 UBA7P41226 1012 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 MTHFRP42898 656 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 USP41Q3LFD5 358 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 FAM171A1Q5VUB5 890 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 BRAPQ7Z569 592 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 GPR149Q86SP6 731 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 PPFIBP1Q86W92 1011 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 GPBP1Q86WP2 473 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 ST13P5Q8NFI4 369 aaPredicted RBP13.05□□□□□ -0.32
LITAF-219ENST00000576334 C18orf25Q96B23 403 aaPredicted RBP13.05□□□□□ -0.32
LITAF-219ENST00000576334 REEP2Q9BRK0 252 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 MRPL4Q9BYD3 311 aaKnown RBP13.05□□□□□ -0.32
LITAF-219ENST00000576334 NT5C3AQ9H0P0 336 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 SFXN1Q9H9B4 322 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 ANKFY1Q9P2R3 1169 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 LIMD1Q9UGP4 676 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 ZMYM2Q9UBW7 1377 aa13.05□□□□□ -0.32
LITAF-219ENST00000576334 MTCL1Q9Y4B5 1905 aaKnown RBP13.04□□□□□ -0.32
LITAF-219ENST00000576334 SMIM28A0A1B0GU29 152 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 CCDC195A0A1B0GUA6 201 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 N4BP1O75113 896 aaKnown RBP13.04□□□□□ -0.32
LITAF-219ENST00000576334 GLUD1P00367 558 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 PDGFBP01127 241 aaPredicted RBP13.04□□□□□ -0.32
LITAF-219ENST00000576334 ADH1AP07327 375 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 MAPTP10636 758 aaKnown RBP13.04□□□□□ -0.32
LITAF-219ENST00000576334 GRM5P41594 1212 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 BRCC3P46736 316 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 SPAG1Q07617 926 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 ATAT1Q5SQI0 421 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 ALKAL1Q6UXT8 129 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 TRIM67Q6ZTA4 783 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 KREMEN2Q8NCW0 462 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
LITAF-219ENST00000576334 RIPOR3Q96MK2 946 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 NTPCRQ9BSD7 190 aaKnown RBP13.04□□□□□ -0.32
LITAF-219ENST00000576334 TCHPQ9BT92 498 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 IKZF4Q9H2S9 585 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 MTMR6Q9Y217 621 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 CITO14578 2027 aa13.04□□□□□ -0.32
LITAF-219ENST00000576334 TMEM221A6NGB7 291 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 M0R296 226 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 BRD1O95696 1058 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 TNFSF9P41273 254 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 PTPN21Q16825 1174 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 UPP1Q16831 310 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 ZBTB41Q5SVQ8 909 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 FOXD4L5Q5VV16 416 aaPredicted RBP13.03□□□□□ -0.32
LITAF-219ENST00000576334 LILRA6Q6PI73 481 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 RSPO2Q6UXX9 243 aaPredicted RBP13.03□□□□□ -0.32
LITAF-219ENST00000576334 SPIRE2Q8WWL2 714 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 FOXD4L4Q8WXT5 416 aaPredicted RBP13.03□□□□□ -0.32
LITAF-219ENST00000576334 RAD54LQ92698 747 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 ZNF707Q96C28 371 aaPredicted RBP13.03□□□□□ -0.32
LITAF-219ENST00000576334 ASIC4Q96FT7 647 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 AK8Q96MA6 479 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 NECTIN4Q96NY8 510 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 C17orf75Q9HAS0 396 aa13.03□□□□□ -0.32
LITAF-219ENST00000576334 FBXO2Q9UK22 296 aaPredicted RBP13.03□□□□□ -0.32
LITAF-219ENST00000576334 RBM19Q9Y4C8 960 aaKnown RBP13.03□□□□□ -0.32
LITAF-219ENST00000576334 SF3B1O75533 1304 aaKnown RBP eCLIP13.03□□□□□ -0.32
LITAF-219ENST00000576334 PDCD11Q14690 1871 aaKnown RBP13.02□□□□□ -0.32
LITAF-219ENST00000576334 TISP43B9A030 160 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.33
LITAF-219ENST00000576334 B3GAT3O94766 335 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 MCF2P10911 925 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 TKTP29401 623 aaKnown RBP13.02□□□□□ -0.33
LITAF-219ENST00000576334 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.33
LITAF-219ENST00000576334 LONP1P36776 959 aaKnown RBP13.02□□□□□ -0.33
LITAF-219ENST00000576334 NCKAP1LP55160 1127 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 STRN3Q13033 797 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 PSMD5Q16401 504 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 SLC10A6Q3KNW5 377 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 XKR4Q5GH76 650 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 IER5LQ5T953 404 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 HAUS6Q7Z4H7 955 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 RASSF8Q8NHQ8 419 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 CALML4Q96GE6 196 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 SNX27Q96L92 541 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 USP28Q96RU2 1077 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 TTPALQ9BTX7 342 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 TIPINQ9BVW5 301 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 CCDC94Q9BW85 323 aaPredicted RBP13.02□□□□□ -0.33
LITAF-219ENST00000576334 PANK2Q9BZ23 570 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 ZHX3Q9H4I2 956 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 STK39Q9UEW8 545 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 TUBGCP4Q9UGJ1 667 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 SSX2IPQ9Y2D8 614 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 HCN4Q9Y3Q4 1203 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 NR2E1Q9Y466 385 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 ZNF318Q5VUA4 2279 aa13.02□□□□□ -0.33
LITAF-219ENST00000576334 A0A087X0B3 334 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 TOM1L1O75674 476 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms